XLOC_040937 (gene) - C. hemisphaerica

Overview
NameXLOC_040937
Unique NameXLOC_040937
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_435:416744..424270-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040937 ID=XLOC_040937|Name=XLOC_040937|organism=Clytia hemisphaerica|type=gene|length=7527bp|location=Sequence derived from alignment at scaffold_435:416744..424270- (Clytia hemisphaerica)
CGAGAGAAGAAAAATTTCTGGAAAGGTGAAATATTTTTTTTACATTTTCA TCCTCTGACTATCTATTGTATCTTTAACTCCATCAGATCTGGACTTTCTC ATGATCATCATTTATCTCAAAGGTAAATGGCTAATCCAGTTAGATTTAGA GTTTTTGATCTCTAAGAAAGTATATATAATAGTCACCAAACCGGTTAAAC TAACACGATGTCGATGATATACAAAATCACGACCCTGCCGATGCACCGGA CAGTCCGGTGTATTGTCCGGTGCCACANCACGATGTCAATGATATATCAC GACCCTGCCGATGCACCGGACAGTCCGGTGCCACACTGGAAACCTTTTGT TCAGTGTTAGCCCAGGGTTAATTTTTCAAACTTGTGTTTCAAAAATAATA CTCCGGCCGGAGAGGCACTGGCCGGAGTCAGCTCTGGTGTTGAGATTGTC CGGTGTTAAAAGGTATTCCCATCCTACACCGGACTTTGAGTGTCCGGTGT TTGTAAAGTCTGTTCCAGCCGAGGTAGGAAACCTATTTTACCGGTACGGG CAAATTTCAGAAAAATACTTTGAAAACAGTTAAAACACTTGAGAAAGTCT CAAAAAATCAGGATAGAACGATAGGAAAGTAGAAATGAGGGGAAATTAGT GACAATGCATTCTGGAGTATGATATCGCGTTTGCCAATCATTTTATTTTC CCCCATTTTACTACTTTCCTATCTTCGATAGACCGATTCTGTGTGGTGTG TGATGTCATTCCCACAATCAGCCATTTTTATCTAAGAAATAACAGAAAAA ATATGTAAAGAATGGTTTAGTAACACCTTGCTTAGCTTAGCTCCAAAAGG CTTGAAGTGTTCCATGCGCATAGTTTTCTCCAGACGGTGTCAATCGAACA ACTTCGAACAAAAATCGCAATCGAACCAATCGAACGTAATCGAACGCGAT CGAATAATTGCGATTCGATTGTCGANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCGAAT ACAATCGAACGTAATCGAAGCAATCGAACAGCAAATCCTGGGTAATATTC GATTGCGATTCGATTGCATTCGACAATCGAACTGCAATTATTCGATTGCG TTCAATTGCGTTCGATTGATTCGGCGTTCGATTCGTTCGATTGACACCGT CTGGTTTTCTGTTAGTTTTTTTATTTCGTGGGTGAAAATTAGTCAGTTAG GAACAGGCAGCTTGCTTGAGATTTGGTTGAAGATAGTGCTTAACTGAATT TTGCCAAATTAGTCTATTCTGATTTTTCTCAAGTATTTTTGAGTATTTTT TTGAAACTGTCTGTACCTGTGAACCAGACCCGACCAGACCCGACCAGACC CGACCAATCCAATCAAACTAATTGAACTCCATTGAACAATTAGAGTTTGA GTAAAAAAATTAATCAAACTCTAAGATTTTTAATAAAATTGTGAGTGATT CAATCAAGTTCAATCAATGGGTTTCGATTCTATCAGTTTGATATTAACCC AATCAGGCTAGCTCTAAAGCTCTAAAACAACATCTAATAACATGAAAACC AAAACATTTTATGATTCTTCAATGGGAAGCAATACTTACAAACATCAATT TGTCAGATCTAACAAAATTAATAATGGTACTGTCATCATTGACAATAAAA CAAAGGATTTTCTGTCAAGAGATTCCAACAACTTCCATCGAAATGATCTG CCACAACTAAGTTCTGCCATTTTAGCACGGTCCAAGGATTGAGCCGAGAA CACTTGCAGAACGCCTGCAAGCTCCTGCATGAGGAAAAACTTTAATCTAT CAATCATTTTCTCAAGAGAAGAGTACGCGAAGCGATTCTAGCTTTACGAT AGTGCCGCAGATCATCATCGGATTGTATTCAATTATATCATTATCCCTTT ATTTTTATTTCTGGAACTTTTTCAAAAAAGGAAAAATAGAAAAGTTGTAT TTTTTACTTCTCTTTTCACATACTGAATTTAAAAGATCTTCTATGTGGCG TTTTTTTGCAAACTTGAAAAAACTGATTTTTGTCCCGCAAAAGTACAGAG GCACAGACTGTACAGAATCAGTGTACTGACCCATAGCTGGTGGAGTGGTG TATTTTTTAGGTTAAATTGAGTTAGTGCAGTTTACTAATCTAAACTATTT TTGTGTTAGGAAATTTTAGTCTCAATCTTCTCGCAAATTTCATTTTTGAA ATCTTTTTGCAAAATTTCTGAAAATATTTTTTCTTCTTTTTTATGTTGCT TTTATTAGTGCTTTTATTTAAATTGTTATTATATAAATTTATTTTAGTTT ATCCGGGAAAATGTACATATATGTACCCTTTGGATTAATTTATAGAAATA GAAATAGAATACTAAAAAGGGTGGTGTTCTGAATTGATACACACTGAGAA GTTTGTTTGTACATTGTACTAATTTCAGTGGTACAAACACAAGAACCCAG CCAGACCCAGCTAATACCCATGTATATTTGCCCTTATTTGTCGAGAAAAG TTAGTACAGTGTACTAAAAGGGTGGTGTCAAAGCCCTGGTCATGGAAGAA GAAAGAAAAATGTGTTATGTCAATGTACATTGACTGTTACAGATTTTGAT TTTAAAGCTGGATATATTTATTGTTTTCGTTTTGGTTTATTAAGGATGTT GTACCTACTTTTATCATGTTTCATTCCTTGAAACTTGTAAAACATTTAAT TTCCTAAACACGAGAATTCTTTGTTAAAATACTTATTACCTTTTTAGTTC ATAGCATATTTTGTCAATAAATGTAGGATCAAAATCTGTAAGTAACTTGA AAAGNTGTAGCATATTTTGTCAATATCTGTAAGTAACTTGAAAAGGACAC GTAAGAGGTCGAAATATCTTTTTATGTTTCACTTGAATATTATTAAGTTA TTCATTTAAGCATTTTATAGCGTAAATTAAAAAATATGGCTAAGTATAAA AAAATTTGCTTTTAAATGTTTTTATACGTAGCAAGAATGGGTAATATACT TTGCTGTATGATTAATTACTGAATAGATAGAAGTGAATAGTACTCTATAA TTGGGATAACAATTTAGGCTGGAATGTTTGTTTGCCATCACCCGACTGAC CCCACCTTGAAATCTGCTGACCCAAAAAAACTGTGTTTCCATTTTAAAGA AGATTATTTTTTCTTCAAATCGAAACCTCTATCGTGTCTGTATATCGTTC TATCTAAGAAGCTTAAAGAATCATTATTTTCTTTTTGCTCAACCGTTTTC ATTTCAAAATTGCACAAATGTAAACAGAAACGCAACTCTAAAATTTAGGG TCGAGTGACGGCAAACCAACTAAGTCCAGCCTGTCTTGTTAACTCCCCTG CTTGACAGTTGATATTCAGCTTTCTGATTAAAAATATTTTTGAAATATTT TAGGAAAGAATTTTCATAAATTAAAACAATATTGTGATGGTTGGGAGAAG TCGTGATGAGAAGAACCGCCATTCTTCCTCCATCCCGCCCTCCCTTGTCC CTGCTTCCAAAAGAAGAGCGCCCAATGGGACTGGTGAAAATAGCAACCGT CCCTCAATACAAATGAGACTAGTTGTATCACGTGATATGGTTCATTATTG TTTTGATATTTTGATCAGTCATTTAAGAAGGACAGATCTCCCCAGATCTA AACATCCCAAATTCACAAATGATGCCTAGTAAGTGGTCTTTTTATTTATC TCTCAACTGAGGTGATTCATGATCTTGAAATTATTTAGAATTATTTAAAA GTAGCAGTAGCATTTTGTTTATGCCCTGCAAATGAAAGACAGATTTATGC CAAAAAAATTTCCCTCTCTAGGCTACAAGAACTTTACAGGTCTACTAAGA CTACAGCAATATATATTTTTGTTGAATTTTTTCTTTTCATAACATTTGAG CAATATTCAATATTCAAACAATTTAATTATTATTCCATTGGGCTGTTCTA TAAAATTTACATACAGTGGGGTGGACGAACCTTCTCAAGTGAAAACAAAT TTCTTGGAAAAGTGTAGATACCCCCTGGAAAATGGCAAAATTTGCAAAAG AACCCTTGGAAAAAATTCTTTTCATGTCTTAAAGTGAGGGTGGATGAACT AAAATCAGTCGTTCACCCCCGGAAATTCAAGAATAACTTTTTACCCCCTG GAAAAATGTAAAAAACACTTCTTTAGTCCCCCTGGAAATTCTTCTTGGAT TATCCCCTGGAAATGTTCGTCCACCCCCTTGTATGGTCATAAAACCCTAA ATAATAATCATGATTTTCATACTAAAGTAACCCTGATCTGACATTTTGTC CGATCCACTTGAAATCGTTATTTCAAGCCTTGACACCTCATTCATGTTTA TATTATTTTCAGCCCCTTGTTTGTGACATGGAAGACTGGAAAAGAATATC GTTTACGTGGTTGTATAGGAACCTTCAGTGCTTTGAGGTTGCACGATGGA TTACGTGAATATTCTCTGTCAAGGTGATATACTCTCGTGGCATAATTATT GGCGTCTTAAAAGACTGGATTACGTCACAACTATAAATTCTTTGAGCTTC TTTCCAAACTTTCATTAGCCTGTCTCCGTCTTAAAAGTTTCGTTTTGAAT TTCAACGAACGTTCTTTTTTGAAAGACAAAATGGTCATTCCTCGTATCCC TTTTTGATAAATTCCATTGACTAACTTCAGATTGATTTAAAAGGTGGATG GTTGCAGGTATTGAAACCACATAAGTGCTAAAATTTTTATTTTTCATTGT TCGTCTTTAGTGCGTTGAGGGACAGCCGTTTCAGACCTATCAGTTTGGAC GAAGTCAATAATCTTCATTGCTCAGTCTCCCTCCTAACTAACTTCGAATC CGAGAAAAATTATTTAGACTGGGAGGTAAGATTTTAAAAGACGTTTTACG ATTTATAGCCAAAATCTCTCACTGTAGAAAGTAAGGCTGGAACGATTCGT TTCCAAATGATCTCCGTATTGTATCGATTCCTGGCCTAGTTTTTAGTGTT GTTGAAAGTCCAACACATACCTTTATTGGAACTAATTTTCGCTGGAACTA ATATTCGCGGTCAAAGTAAAATCGGTAAAATTGCATTTCGTGGGTTTTAA TTTCCGTGGTTTTGCCCTTTTTTGGACAAATTTCTTTCATTTTCCTAGGG ATTTTTTTCAAATTTTTCGATATAATTGGAAACGATTGTATTTCGCGGAT TCAAATTTTCGCAGTTTTGCCAAAAAACCACGAAAATTAGTTCCAATAAG GCGAAAGTGAAATCAGATCAAGATGAAATCAGAACTGTAACCTGTTTAAC ATTTAATTGTCGCTAGATGCATGATATGGAACATTGCTCATTCTTTTAGG TGGGAGTTCACGGAATAAGAATCGAATTTCACAATGAACGTGGTCATCGG AAGAGCGCCACTTATCTGCCAGAAGTCGCATCAGAACAAGGTATAATGGA CTCTCTAACTCTTTTGTCAACAATGTTTCAATCATATCATCTTTGACTCG ACTTATCTAATTATAAATCTAGTAGAAGTATGCATATAACATAGGTTGGT GTGCAGAGTTTTGTAAAATCTTTTCAAATAGCGCCATATCAAAAAGCAGC TTAAATTCCATGCGCCTTTTTATGTCTCTTAGCTCAATCACTGAGTGTTT GGCCCTCGAGCGCACATTTCTTGATATGAGTGTTTCGTTGAACCCGTTGC TTACAGTGTTACAGTAACAAGCTAATCTCGAAAACGTCACGAGTTTCCCT CTCTTCTCAACACTTAACTAACAATTTTTTTCGTTTATTTTAGGGTGGAC GCGCAATGAGGCAATCGACTCACTGGTCAAGAAAGCAGGCTATTATAAAA CTATAACAGAGGACTTCCGAAAGACAATAAAACTAACTCGCTATCGAAGT GAGAAAATTGTTCTTAGCTATGATGAATATTGCGCTGATAATGATGTCAG CTAACGAAAGTGGAATGGTAGAGATTTTAAAGACTTCTTATTTGACTTGT TGATTTTCTTCTCGTGGAAAAAACGAATGGTTGGTGATGATTCGAACTTT TAGTTTTAGTGACGTGTATCAATATATCTTGATGAACGATTCAACTTTCT TTTAAAGGCTACACCCAACGCCTGAAGAAGACCTATAGCTATAAAACAAC TTTTTAAACAATTTTGAGTGATATTTCCTAAACACTTCATTAAATTCGTT GTCTGCTGTGAAGTTAAAATTGGCTTTTAGAAATCGATTTTATAAATATA ACAACTCATCATTTTTACATTAGCATCAGGAATCTTTCACTTTTTAGGGC TTTTCGCATATTATTTAGTCAGCCACACAAAATCGAAGCAAAATTTAGCC ATCGAAAATCAGACATAAGTAGATTCCTTCTAAGTTTCCTTGGATAAATC TCGTAATTAATTTCTAAATTTGATGCATGTAAAAAAGCCCTTTAACAAGT GTCTTGTGGGGTGTTAAAGAATATACAATAGTAAAAGGTTTATATTGGAG ACTTGTTTTTACTAAGGCGTTGGTTACAGTTAGCCGGGTTGAAATGGAAA AATAATTCAACTCGGGATGAAATTCACTCCGGCAGGCTAGACGGAAGCGA GGAGAATTCAGCCTCCCCACTTTTGAGTAAATGAGATTTTTTTCTCTTAT TCATAGCAAATTTTATCTCATTTTGAGCCTTCAGCCTCCCCACTTTAACG GCTGTTCCGCCGGGCCTGTCCGGTCTATATAGAAAATACTGTTTAGGCGG GGTGAAATCGTTTTTAAGTGAGGCGGGTTGATTCCTGATGAGGACCGAAG TGAAATTTCTTTGAGGAATTGTTTCGCAAATTCTTGCAGATTTTTAATAC ATGTAAAGTATGTGTCCAGTTGAAATTTCACATATAGCTGGAGTGAAATT GTGCATACATAACACAACGTCTCCCCGGCTACGTTTACCCAGCGCCTAAA TTTCAAGAAGAGTGGCTCTTTGCTTGGTTACGCCCTGTTTTTATCTTTTG TTTCTGTGCAGAACCTTGATTTTGTTTTTTTTCTTACGTAAAATGTGATA ATTTCAGGTTAGGGAGTGAGCGAGTCTTCATATTTTTAGTATTTATATAT CATTTTGTATTTTTCGTCGACATTATTCACTCATTGTTTTATGGAGAAAA ACAATTAAATTTTTCATTATCGAAACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065300TCONS_00065300Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065300-proteinTCONS_00065300-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_435supercontigscaffold_435:416744..424270 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.18 17.72 12.76 12.16 38.93 32.1 29.96 31.85 17.87 19.44 13.77 11.59 9.32 9.07 7.46 8.21 17.04 13.26 5.45 8.39 10.67 11.3 15.1 13.13 10.87 13.58 28.94 22.41 20.4 21.52