XLOC_040985 (gene) - C. hemisphaerica

Overview
NameXLOC_040985
Unique NameXLOC_040985
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_439:607787..611164+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040985 ID=XLOC_040985|Name=XLOC_040985|organism=Clytia hemisphaerica|type=gene|length=3378bp|location=Sequence derived from alignment at scaffold_439:607787..611164+ (Clytia hemisphaerica)
GGGTCAAAGTTTCCGCGTTTACGAGTTTTCCGCTCGCTTTGAcctttctg
gaaaattttcctcGGAAACCCGTGGCTCGACACAAATTTGTTCCGCTTGg
aacaaaaacaaaggaaaccaAAATGGTAGCCTTTTGCAGCGGGATTTTTT
TTAACATGTGTGTTTTTAGAGATTTTGCTTGTCAAAACTGTCCTTCTCAC
AAATTATCCTGCCAACCTTTACAGTAAAGTAATAAAGTAAAGCACTTCAA
GAGGAAAGAATGGAGAACAGTTCTGATGTAGATTCAAATGATaatgaaac
tttcaaagaagaagaaggaaCAACAAACGAAAGTGAGCCAGATGAAGTTC
CATCACAAGCAATAAATCTGAACAATCCAAAGGCAATGAAGAAACTATTA
CAAATGTCTACTCCAAGCCCACAAGAGCTTGACCCAGATGAAGAATATTG
TTTTGAATCAAGTACACTTTATGAAGATAAAAATGCGTTCATTTCAAAGC
TTATTGAGAAGATCAAAGAAAACCCATGTTTGTACGACCATTCAACCTTT
GGGTGGCGCTaccctgaaaacaaaaaagaagtttgGGAGAGAATTGGGAA
AGAGCTTCAAGTTGAGCACAGTGAGTTTTAATGATGATATAATATAAAAT
TATCCTTGATTTTATTTACTGTATGACACTcaattacattttatttttac
aattttattttatttttaaggaaGTGTACAGtacggtgaaggcttcttcg
taaaagcgaaagacatgtatctatttttggatccggcatgcgggaatagt
gtcaggacctgcaggcgacctggtagggttgggtatgggtgtggtttggg
tgtggttacgtatcagattggctaagaatttggttattatcagttagggt
tagggttggagctcaaaacaagcactcttttgtgattttctctaaatata
gtctggtctgcagtttgtatatacaatataaatagccgtcagaaacacta
tctcggcatgaatccgtggcgcagtggataaggcattgggtttcaaatca
tcggaactttgcatttagtgggttcgaatcccaccggtggcgatctgtcg
gtaagtcattcagtaagttagaaaacatagaaaataactcacataaccag
aaagtcaggaaaactacgaacaagagactggaaagtacgaaataagtcca
gatctgtctttcgtctttacgaagaagccacgaccgtaCAGTACAGACTA
TGTGCAAACTTAAAAAGGTCATTTTGTTTTGCATGAGATTTccatttctg
cactaagattcctCTGCCACTTTTCTACCGAGAAAAGACCCATGGTGGCC
AGCAACCCTTGAGATCCTTAAAATCCTTGAAACGTCCTTGATTTTATTTC
TACCCttgaaaatttccttgaaaaccttgaaaatatgATGATTTTCAGTA
GACCCTTGAGCTACCATAAGTtagtctaatgttgacatccctcttctaat
tccgacacccttctttagagataggaataatagaaaggtcagaatcactg
atagaaaaaagatttatccctCTCTGATTGCTAAGCAAAAAAATTGGTTT
CAATCAGCGATTTCGACCTTCCTATTATCAATTTCTATGGGGGACCGTTT
CTATCTCCAAAGAaagtgtcgaaattagaagagggatgtcgacattagac
caacttacagtatgaAATTTAGagccttgaaacccttgaaattcAGAAAC
CTGGAAAAGATTTCAGTTCATTACTAAGAACCTTTCAAATGCAAAATTTT
CCCCACTTTGTGGGGATAAAAGTATATAAGCCTACAAGGAAATCAAGCTA
TAAAGAAAGCTAGAAAATAAACTAACGCTATTGTTTTGGACAGATGCACG
GTGACAGGAGGGGTCAGGGGTGCCAAGGCTTCCCAGCGGAGCTTTTTCGA
GGGggccaaattttaggaaaatccTAGCTTAGACAGCGCTTTGAAACGTG
AAAAGGCGCTCATTTATAAAGAAAATTGCAaactttattaaattattttt
agaaaaatgtgaCAAGTGCGGGATGGGAATCTAATGCAAAACGACGTTAG
Taaggatgtcatgttgaataattaaaaattccaacatcaaaacaatgata
ataAATAAGTGTACGCTGTAATAATCATACACTAATGTGTCATTGTTTCA
ATGCTGGACATCCTGACTAGCAAAATGTCTATGCTCACGATTTAgtccct
ttttttaatttttaactaaGATCtccaattttattttctcaatctctttt
attttagtaaccctagaaaaagaattcaagaaattgaaagatAATTACCG
TAAATGCTTGAAACGTCGCTCAAAagctgaaaagtcaaaaaatcaaaaca
aacagttGGCAACTTGTAATTTCTTTGAAGAACTATCATTTCTTAAAGGT
CACTTTCCACCTGCAAGTGATTTAGAAGTTAGAACTGAATCTATTCAAAT
ACCCCAACCATCAGTAAGGCAAGCAAGAACTAAAACACATACAAAAAAGT
CTTTAACTTCTTtatcaatgaaaaagttttcTATCCAAGAGCTGAATCCA
AATGATATATCACAAACAGATATTGCACTAATGTCTACAAATGCATCAGA
AAACAATGTAACTGCAAACAATCCACAGTCACTTACTCCTACCAAAATTG
ATCAAGTTGGAGTTGGAGAGCTGGAAACAACTAAAATGATAACTAGTGAT
AGTTCATTACACTCCACAAGTTCTTTTGATATTCAATCTGGACAGGCTGC
AACCCAAAATGACAATACTCAGCTGTTGAATGTGAGGTACTTTCCAAGTG
GTAAATTACCTAATGGTATGAATTCTACACATGAACCACcggaaaagaaa
cataaactcCACAATGGTAATATGATTGAAGCAGACCCAAATATAAAAGA
CACACACCaacttttttgtgaaagctTAGTTGAACCATTGCGTAGTCTTT
CACCAAAGAAAAGTAAActtgcaaaaatgaaaattatgcaAATATTATAC
GAGCTGGAAGAATAGCCTCGGATATGTTGAGTCTTACAGTGTTAtcataa
tgtttttgaattggATACGGAGAAACTCTTCCCAGTTTATTTaggattta
attttttggacATCTAGATATTAGCAACCTTTCTAGTTATATTACATAAT
TTGAACTNCTTAAAGGTCACTTTCCACCTGCAAGTGATTTAGAAGTTAGA
ACTGAATCTATTCAAATACCCCAACCATCACAAAGGCAAGCAAGAACTAA
GACACATACAAAAAAGTCTTTAACTTCTTtatcaatgaaaaagttttcTA
TCCAAGAGCTGAATCCAAATGATATATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065374TCONS_00065374Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065374-proteinTCONS_00065374-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:607787..611164 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.16	8.97	6.65	6.74	7.52	5.93	3.72	3.78	3.45	2.91	3.02	2.61	2.23	3.9	3.41	3.27	3.31	3.1	3.56	2.71	3.25	3.34	7.56	6.89	1.55	2.21	1.69	2.41	3.6	3.36