XLOC_041576 (gene) - C. hemisphaerica

Overview
NameXLOC_041576
Unique NameXLOC_041576
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_455:418176..421542-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041576 ID=XLOC_041576|Name=XLOC_041576|organism=Clytia hemisphaerica|type=gene|length=3367bp|location=Sequence derived from alignment at scaffold_455:418176..421542- (Clytia hemisphaerica)
GAGCAAAGAGTTCAGAGGGCAATCAAAGTAATCAAATTTCAGGTAAATCT
CCAAAACTGTGTATAAACATAACAAATAAATTGTGTGTTACAAATTTATG
TGCTTTAAATCTCAAATTTGAGTGAGTATTGTTTGTTAGTCTGTGTGATG
AAAGAACTTTCTTGCGAAGTTTTGAATAAGACTCGGTAGTCTCAAAATTT
TAGAAAATATAAGATTATTTTAAGTCGCATAAAGTCAAAACTTTCAGAGA
CTAGTGTAGTTAGATCAAGGAAAAACCTAAGATCGACTAATTCTTAGATC
TGCGCGCTAACTGAAGTGCACATACGTTCAATCCTGAATTTTGGATGCGG
GCAATCTAAATAAATCGTAAAAAAATATTTTCAACCTGAGTATCCAGGTT
AAACTCCTTCAAAGCATTGAGTTTAAAGCCCGAAGGGCTAGAGTAGAATC
TTTAACCTATCCCAGGCAAGAAAAAGTGAAGCCACTTATTTCCCATCTAG
AACGCGCCTAGAACGCGACGTAACCATGACAAAAAATTTTATCTCTAGCG
GTTTCTTTGTTTTTGAGGACTGCCTGCCTTTTTTTAAATCTAACGACAGA
TTTTACTTTCAATCCGGCGTTTGTATAAACCGCGCGCGGGCGTTCTGGGT
GGGATACACGTTTTTTTTTTATAAGAACAAACTATATAAGAACATAAGGC
TTCGAGCCCAAAAATTTAAGAACATTCTAACAACATACTAAGGCTTTGTA
GACTTAAAAACATGCAATTTCTTAAGAAATTACATCAAAATGCTCAAAAA
ATGCTGAAAATAAGAACATTTTAAAAACATTTTTAGGCTTCAAATCCAAA
AAACTAAGAACATCCGAAGGCTTCGAAAATTTTTGATGTTCTTATAAAAA
AAAAACGTGTAGGAGTCTCGAGTCTAGCCCTTCGGGCTTGGAGGTCAATG
CTTCAAAGTGGAGAGGAAAAACGAACCGAAGTGGAAAAATAATTTGATCT
TGAAAATTATCAAATCCCAAAAACATACAATTTTTGTTCCTTTTTCAGCT
CAATACAGGAAGAAGCGAGAATGGCACCGTGTAATCCATGGAAAATATTT
GGCTATGTGTCATTACTTTATTACTTCTATTCAATAATTGGAATCCTGAT
GTCGTTCATATTGGTGAGCAGTCTTGTCTATTTCACTGATGGTTTGAAAG
ATCTAACTTTCGCGAATCGAATTATGNAGCCTTGTCTATTTCACTGATGG
TTTGAAAGATTTAACTTTCGCGAAACGAATAATCATCAGAGATTGTTATT
GGGCTTTTATTTTTGCAACCAAGTTTATTCCAGCTATCAAGAGAAACAGA
GATAAAACTCCAAATCAACTTTTACGAGAAACAACCGAAAAATATCCGAA
CAGAAAAGCCCTTGTTGACGCAGAAACAGGGCAATCTTTAACTTTCAACG
AAATTCAAATTTTTATCAACAAACTTGGCCATGTCATTAAAAGCTTCGGT
TACAACCCTGGAGATAAAATTGCACTTTTCCTTCGAAATGAATTGGAGTA
TGTTCCCATATGGTTAGGATTGAACAAAATTGGTATCCAAGTCGGTTTAA
TCAACTTTAATTTGCAGGGAAAAAGTTTGGAACATTGTTTAACTGTTGTT
GACTTTAAAGGTATTATTTGCAGTCCAAATCTGGTGAAGGTTTTAAAGAA
CACTGATTTCCACGAAAAATCTGGTGTCAAGATTTTCATTTTTGGTGATG
AATCGTTTGAAGGAGATTACAAGGATCTGAAAAGACTGATCAATGACCAA
AAGGATTCTAGCCCTGTAGGAGATGATATTAAAGGACCAAAAGGCACACC
TCTATTGATGTATACCTCTGGAAGTACTGGCAAACCGAAAGCAGCTCGAG
TTACAAATGAAAAGATTTTGGGTCCTTTTATCAGTAACGAAGTGCTTACT
AACACACCTGAGGATGTGGTGTATTGCGCCCTACCGTTCTATCATGGAGC
GGGCGGTGTGGGTGGTATGTCGCCCATGATTTATAACGGATGTACGACGA
TCATTCGAAAGAAGTTCAGTGCTTCGAATTTCATTTCTGATTGTGTGAAA
CATGATGTGACGTGGGTAGTCTATATCGGTGAATTATGGAAATACTTGTT
GTCACAGCCACCCAGAGATACCGATCGTCGACATAAGATTCGAATTGCAG
TTGGGAACGGCTTGAGAAAGAATATGGTCGGACCAGTTAAAAAGAGGTTT
GGTGTCCAACGAATTGTGGAGCTTTATGGTGCTACTGACGGTAATGCAGT
GATGATTAATCTCGATAACGTTCCCGGAGCTGTTGGATTTTACTATTTCT
TGTTCCCATTTTTGAATCAGAATTGTTTGGTGAAAGTGGATGTTGAAACT
GGCGAGATTATCAGAGATGAGAATGGTCGAGCTATCCTTTGCAAACCTGG
CGAAGTTGGTTTGATTGTTGGATTGATTCGACAGGATAGAGGATTTGAAG
GATATGTCAATAATGCTAAGGATACTGAGAAAAAAATCATCAGGAATCTG
TTCAACGATGGTGACTCTGCTGTCAATTCTGGTGATCTTTTGGTTATGGA
TGAATATCGCAATGTGTTTTTCGTTGACCGGATTGGCGATACCTTTCGTT
GGAGAGGTGAGAATGTTGCCACAACTGAAGTTGAAAATATCATGTCATCT
GTAATCAGCACTGCTGAAGATGTGGTCGTTTATCCAGTACCTATACCAGG
AGAAGGAGGGAATGCTGGCATGGCTTACATTCGAGAAAAAGAAAACCAAC
AGTTTTCAATTAAAGGTGTTGCTCAAAGTCTGTTGGAAGAATTACCAAAA
TATGCCATTCCAATGTTCATTCGCATTGGTCGAAATCTTGATCAAACTGG
TACTTTCAAATATCAAAAGANCCAATGTTCATTCGCATTGGTCGAAATCT
TGATCAAACTGGTACCTTCAAATATCAAAAGAGCGCTTTGAAGAAAGAAA
AATATGATTTGAAGAGCTGCAATAAAGATGATGTCATTTATGTCTATGAC
GTCACCAAGAAAGATTACGTAATTCTCGATGCAGAATTGCAAGTTAAAAT
TGAAAACGGACAAATGAGATTCTGAAAAATAAAGACAATCATCTTTATAG
TTATAGCTCTTCCCTTTTTGTTGTATAACATCTTGGGAAATATCTTCTTA
TTTTTTAAGTTAATTTTTTGTTAGTAATGATTGACGTGATCTAACAAAAA
TGAAGATTAAAAAATTTGAAAATCAAATTCTTTTCCATATGGCTGAAGCC
TCTGCTGAAGATTGGGTACTAGGTTTGCCGGATGACGCGAATGTGCTAAT
TCGGAAATGATTGGGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066459TCONS_00066459Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066459-proteinTCONS_00066459-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:418176..421542 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.33	0.93	0.02	0.55	0	0	1.23	0.52	0.43	1.39	1.61	1.61	3.45	3.84	1.8	2.37	1.82	2.28	0.57	0.99	1.45	1.61	1.36	1.53	1.13	0.94	0.38	0.72	0.83	1.54