XLOC_041980 (gene) - C. hemisphaerica

Overview
NameXLOC_041980
Unique NameXLOC_041980
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_466:313779..321051+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041980 ID=XLOC_041980|Name=XLOC_041980|organism=Clytia hemisphaerica|type=gene|length=7273bp|location=Sequence derived from alignment at scaffold_466:313779..321051+ (Clytia hemisphaerica)
TTGCGCGCGaaagtaaaaaagtaaacaaaacctGCTTTCACTTTCCTTTC TCTTTAGCTACCTGACATTGACATCTTCTTCAGTTCTTGTACgttatttt gttttgacttttatCCATGGTCCATGATCCTTAGCTCGCTACCATATTAA GAAGTTGAGAAATGGTTCAAATATTCCTAAAGCTGTAAGTATTCTTGCTT TAAGTACTtaaataccgtgagattgggtaacttgcatcagtggaggctaa catgcatagcatagccctcaaataaaagacctggctggttattaaaatac aactacgcagctccactcTCAGCTCttctctaccattttgttttgaatta actttgtattttaatgaccagcctatgcatgttagcctccactgatgcaa gttacccaatctcacgatATTCACCAGTATTCATCCTCTAGTATAGTTTC CAGATAGACGTTTTGTGGTCGAACGCGACCAAATGgaacagtcttttgaa taaacTAATAAACCAGCTGCACTAAGTCAGCCCAAATGGCTGAGACGATG AAGTACAAATAAAAGACCAAGCTTTGAAGGGCGCCCCATTTGCTTGGAAc gtttaagcaaaaaatgatgATTGGCGCACAATGGAATCCGTCCAAATCAG ATGTCGATAGAACAATTTTCTGGtcttagaaaaattagaaagaaATCATT TCATCATTCTTTGGCCTTTCTGATAGCTTTTACATGCGAGGGTACTAGTG TTGCGAGCTGAGGAGTGGTCCACCAGCCTTTTGACCATtgcagttaggaa catttggcgagctcctgtacgcggccgcaatcaaaaaaatcaaaacgtca ctcattaaaaaatgacattcgtgtcttttcgcactttctTTAGCCTAgac tagacgatgtagcaaacatagtaagtataagcataCTGTGCTTTCCATTG GCTGAAGTTTTCTTTTGCGTTGGAAAAACTTTTccaaactttcagcgatg attgaccaaactgttacaatgaaaattatccagcgcattttttatcttct taccttcttcattttcaatgaagcacttgaagtttactgaaggtaagcac ataatatattcttataattaattaTATATATTCATTTAAACACGCTTTGT TGTGCACTGCGGTGGAGTGCacgacgtaactcgcgcggcaactaactcgc cttctgttggaagatcatattgggcgttttggcgtcaCCACCCTCAATGC AGTGGGCACCTTTGTCTTTCcacaactctttccaccattttagatggcct taacaatagatccaaaagggcgccataatcttggaagaatAATTTGTTTT gctctccggctttgggaagtagcaatgtttttggttgtttttcgatggaa aatgctAAGAAatttaagtttacaagtgtcatttagtttttgctggctta tagaatggcatgatcctggatggtttccctaactgccTTGGAACTTAGCA GAacaaaaaaggaggaaaaaagtggaaatttttccgaccctttaTGTGAC TTAAATATAAGTTTCTAATTTTCTCTACCCCTACAGGGACTGACAGGCTC CAAAAAAGCATCCTTAAGGGTGATACATACCAGTATCTTTGCCTAGGTAC TAAGTTTCGGTGGCAAGCAATGATAAAATGCAGAATATATGGATAGTTTA GAAGCCAATACTCCTCTGTTTATTAAATTCAATGTggttttaaggctaaa aattaGTATATCGATcacttttttagttttcaaaatcttgaaaaagatGT CTGGCCGAAATTTAGTACATNctaaattgaaaatttctcccgtcggcgca aaccatggttgtgcctcctcgttccccttttgaaaactattcacgctaat tcacaattaatgctCATGGAACCCGTCAACGGGGGGACCAGGGGGCATGG CCCATCATGTTGCTTGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctttgaacccttca aaattcaaagaatttctccgttacccaaccatggtgggctttgtcaattt actcaaatatacctcagccctcaaactggtgccctttgatgtgaccaggt gtccaacaatttttgatatgcataagtcaagattacgtcatttttcctat cgaaaaGACCcaaaaaaacacccctgtgtcaaaaatagaaaaacagaggt aaaaatctagatttttcgCNAGCAGCAAGCTCGCGCTTGATCCAGCTTTA GCTTTTAAAGTATCCTTGGAAAAGCCCATATACAGAAGAAACGGTCTACA TGAAATGACAGTGATACAGAATTGTTCGAAGAAAAGAAAAGTTTCTTTAA AACTCACTTTCTTTATAAGCTCTATTAtatttacaatttctttaataatt aattataTTGATAACTTTaagaaaaaatacattttcttttattcttttta ctATAATTATATGCCTCTTTTTATGTTatgtgttttttcttttctttagc ttttactaagaaaaattattttcccgcGCTAAGCAATCCCGATAAATTGT TTCCCGAAAATAATCCAAAATCGGAATTAAAAACAAATCCAAAGCACTTC TTGGCAGCAGCGGCttgcaaaaaattttcaaaccgatttaaaaaacggcg tgatggcgtgaaaatgaagtgccggcgtgatcgtgaaatctagttttttt aggcgtgatggcgtgaaatttgtaGTTctgcgtgatcgtgaaaattatat ttattagttgaatcgtatttctatgtccattttagccaatttagagggtt tagatttcaaaattttcttggtcggccccaactatgNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTCAAAACCAAAACAGTGGTGTTTTCACCACATTTTGGACTT TCTGTTCCGCCATTTCCATATAAAGCATGTTGTTCTTTCCATCCAGCAAG CATGGTCCCGTCGTCCCACCATGCGCGGgtcatgcatgcaaactttaaaa taagcgaggcaagacgtgccaacctcgtttccagactgttttcgaaaaga cagtatgttttaaaaaagatagtatcgttttaaaatagatagtattgttt aaaaaagatagtatcattacaaaagatagtatgttttaaacgagaatagt attttttcaaacggaaatagtattttttcaacgaaaatagtatgttttaa tcgaaaatagtatttttttaaaaagatagtatgttttaaacgaagatagt attgttttaaagagatagtatgtatttccgctttggcgcgccatagagta tttagttattcaaaagaccgcCGCGTTTGCCAAAACATCTATTAGGcaca attttgaattgaaaagttttgtgtGAGAATATTCTAtctgtaataaaaaa atcaaattatagaTATCAAGTTCAAGGTTCAAGTTTCAAGTTTATTTTCG TTTTATGAGCTTTGTACATTTCAAAAATTCCTAACAGAAAAAAACCCTAA GGGTTTACAAGGTCGACAGGAAATAAAAACTATAATaatatataccttaa gggaagaaattttggtggctggaaagaaatttaaatttttagattcaaaa TGGTATTGTGTCCTACTAAGGTTGGCTAATTGTATCCAATATACCTTCCC GGTCCCCTAAAGGTCTATTCTCAATCTTAACCAAGAAGGTTTTTGGGATG GATGATTTACTGATGAACCTCAATGTGATCATTTTGGGGCTTTTAGCTGT TGTGTTGTGTGCTATAATGGAGGTAGAATCAAACCTTCAATGTTGAATAG TTTTTTTGGATAACGCGGCGACCTAtttattgaataacaaattactccct CAACCAATGAAAAATGTAGTAAATTATCTTCTCTCTAGGTAACTGTCGTG GAGTAATAAGTTATTCAATAGGCCGTCATgctctccaaaacaactatttt tTGCATTGGCGGCGCTTCACTGATTTTCTATTCTGGGAGGATTATTCCTC ACTTTTAAGTTCAGTACTttcattgttttattatttgaagAAATATTCTT TTAATGTTTAAGTGGAGAAGACCCAAAAGAATGGAGCATTGTTGAACTTC AAGGAACTTTGGAGAGCAGTGAAGAAGAATTATGTGGAAGTCATATCGGA AATTTACACTTTGATGATAAAGTAAGCTCCCTTTTTAGCATAAAGACACC CATACCAATCTACAGTGTGCCTGGAATAAAAAGTGGAACAGAAATTCTAA AATAAAGATGGATAAATCCATTATTTCTAACTATTAAATGtcatgaaaat gaaataattatttcctttactttttttaaccctatttgatttttgtaacc cggggggggggggggtagaatttATCACCctcaattattttttatctgaa aatacATATGTTGGTACATATGTTCTCATCAAAGCGATGACTTCATGAct aaatttccacctgtcggaaaaaagcaaaaagttatGGTTTAAAAAAATGT CTGTCACAGTTTAACCAatataaagatattcaaattatGTTTGAAGATTC TAGAGGATAAAAGGTTCCCCtgtaacataattgccggttttggaTTTTCC ATAAAGACTTTTCTTTAAATcaatgctgaagatgagtaaaattttcaaaa tttgtcacaAATGATGATATTTTGTAAAGTAGCTCAATGGTTGGGCAAAt gcccgcgaatggcatggttgtgaaTTCGAGTCTCACCGGATCTGTTGGTT TTCTAACGGTTCTAGTGGCTGGAAGAAGACAGCACGAGAGCGACTGTATT TACTTCATATTGTAATACATAAGGgcattcattttgtaaaattaCTTTAA TTTGCTTTTCCAGGGTACGCCTCAGCTAATTTGTGGTCACCACCTGGTGA CAGGCAAGATTCAAAAACTCGATAAACCATATGCAGTAATGAAGAAAAAC AGTATTTCACATGGAATGAGCGAGTCAATGGAAATCGATGATTCAGATGG TCAATCAACAGCCTACGATATTGTTGCTTTcgtcaaacaaaaaataatct tcAAAAATCGACCCAAACCAATAATTATCAAAACTCAACCAACAAAAACG TGATAGTGTGAGGCATTCTAAAGGTGGCTTGATCTATATGATTTTGTTTC GCTCTCATTCAGTCAAATTTGAGAATTCCGACCACTTCATAAAACTTTAG ATAAAGCTGCACGGTGGATTAAAGATGATGttcatgttaaaaacatttta tttggaTTGCATAACAATTATCTAATATTATTTCTAGAAATATTAATCCT ATTATTGTAAAacgggctcttccagaaaatgttcgtacgtaggggttgga ggatatagtgtccgggggtagtgaaaaatctacaaaatttgccttgtcca gggggtaaacttgctctgttttgggggtaattttgctctgtttgagggta atctTGAATGTCCAGGGTatcaactaatgcttgtccggggcTTAGACCTG CTGTAAAAAGTCACAATCTCCGGAGggtaaaattccaaaaaaatgttata tcccccccccccccccccatattcaaatttttctggATAAGCCCAATATA GTTAAGTGTAAAGTAACGATGAAAAAAAGTAGAATTTGATTTAAAGTATA TCATTTTACCACAGTAATCTTACTTACTGCTTGCGAGTGTTTGTAagcca aaaaattcaaaaacaacccTGTTTATTTATTGACACATATAATAAACAAA ATTAGTCTTTTTTGTGATCCAGTAGAATTATACAGTATGACATACTATTA TACCAAATTCTTGaaattagagctttttaaaatttgatggatAACGCATC TAAAGGTCCGTTCTTAAAATTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067200TCONS_00067200Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067200-proteinTCONS_00067200-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:313779..321051 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CHTF8chromosome transmission fidelity protein 8 homolog Homo Sapiens
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
53.28 51.39 29.65 30.29 6.59 6.86 6.44 6.42 8.72 6.93 7.96 8.07 4.87 8.13 8.66 8.98 8.64 10.19 7.48 6.06 9.74 9 28.14 24.84 7.82 8.9 6.88 5.16 10.97 10.74