XLOC_042871 (gene) - C. hemisphaerica

Overview
NameXLOC_042871
Unique NameXLOC_042871
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_489:20169..30661-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042871 ID=XLOC_042871|Name=XLOC_042871|organism=Clytia hemisphaerica|type=gene|length=10493bp|location=Sequence derived from alignment at scaffold_489:20169..30661- (Clytia hemisphaerica)
CGAAAGAACATTCGAATCAGAAGTATTTGCTAAAAAATGTTTTCAACAAA TATTTGGTGAAGATTGCGGTAAAGTCGGACTTTATCAATTTATTGCAGAA GCAAAGAATTTAGCGCAAAATTTGAAAACTCTTGAGTTCAATCAATTAAT AGTTCCTAATAAATATTGTTTCAAATGTGGAGGAGTAAATTACATAATGG AAAAGAAGGCGAAACCTGTAACCCTATACTGTGAAAATGGTACTTCACTG GCTTATAGATATTCAGGTAGATGTAGGAAATGCTCAATAACAGACTTCAC TACATTTTATTCATTCGATGGAAATCGCTTCCTTAAGATTGACGATGAGA CTAAGTTTTTACTATCCACTGAAGACACGGCATTCGAAACGTCACTTTTG GAAACATATGAGTGGGAGATTACCATTGGTTGTATGCCCTTTCGCTCCAA AGTAGCAATTTACAACTGCAAGCATGGATATATGACGGAGCCCAGTGAAA CAAACAATAAAGAGTAAGAAAATTATTTTGAATATCATCAAACATAACAA ATTTCTATCAAAATTATTTTTTACAGTTTTTTAGTCGGCTAAGGCCCGAG GGGGGGGGGTACTAGGGTTGGCAGATGAAGGATATGTGCGGATGGGACAT CAGGCCGCAAGCTTATTTTTAGTTTATAAAAAGAAACTTAATATAATAAG AACATTGTAAGAACATAAAGCCTGAAAATTTAACCCCAGTCTGAATATTG GTTCTTATAAAAAAGCGTGTATTTCAGAACAAATAATCTGTTTGTCTTTT TGATAGACATCTGAAATTTCATTGATGCATTAAAATAATGGCACGAGGTT GTACTTTGGCCCTTTTTTATTTAAATTTTTGGACCTACCACGGAGGTCCT TCAAATTAACTGATATTCGTTCGTCCGTCCGTTCGTTCGTCTGCTACCAG CTTTTCTCGAGATTGGCTCATTAGTTTTTCCTGTATTTTTGCACAATGAT GCAAAATGGTGATCCCAAAAAGTGACGGAGCCCGATTTTCGAAAAAATAA TTTTTGGGCAAATTTGTGCCAAAAGTGCCTAACGTTGGTTTTTTTTAACT TTGGGGGGAAATCACCTTTTATCGTCAACAGGGAAATCACGCTAAAATAT TTATTTACCCCAGTATCTACGACTACAAGTCATACGACTTTAACAATACT TCACAGGTCGATATTAATTTGAGCCCCGGATTTGAGCTGTGATACACGCT TTTTTTATATGAATGGTGTAAATCCATTTCATCATGGATATTCTTAACTT TTTTGGGAGAATCATCCTGAAATATTCTTACAGCACACCCAGCTGGCACA CAACGTTGTTTCAACGTTTATCTAACGTTTATATGGACGTTGTGAACGTT AAATAAACTTTGAAACAACGTTGTGTGCCAGCTGGGATTCTTAGGTTAGA ATCCTAATTCATACTAGATTTAATATTTAGTACATACGTCTCAAGCACTC ATGGCACTTTTGTAAAAGGAGTGAGCCTAACTTGGGGATGATTGATAATT TATAATTGAAAATGCTCTTAAAATGGCATTCTTAACTTTAGCCTGGATAT CCATGCTTTCTTAGCTTTAGTAGCAAAATTCCATGATGGTGATACTCTTA GCATTGTTCTTAGTTTTTTGGCCATTTTCATCATGGACATTCTTATAATG TGTATTCTTAAAAAAAAAAGCGTGTACTCACGGTAATCTATTCAAGCTGG TCACTACACTTTTTTACTCTCTTGCTATTTGTCCTATTTTTATCTGATTC TCATCATCAGGTAAGTCCATTCAGCATGTTGCTTGTTTCTTTTATGTCCA TAGGAAGAAAACGACTATTAACAACGAGCGTCTTTACCTTGATCGACGTC GCTTTACAGATGGCTTTTTATTGTATTTGGTTGCGAAAATTTCAAGAAAA TACAAAATCGAAGTCAACAGTGATGTTACTGATAGGAATAATCTTGTAGA TTCCATCAACGAGAGCTTCTACGACGCTTTTCTTCAGAAATGGAGTAGTA AGTGCAGGAAGAAATTTCTTTTTTTAAAACAAATATCAAATATAATATAG AAATAACAGTAGTACTTTCAATGAGTAGCTTCTAATGTGATTTTTTCTTG TGTGGTGTATAAGTTTGAATAGAGAGTATCGATCTCCAGACTACACAAAC GCCGGATTGAAAGTAAAATATATTGCCAGACAAGGCCAGAATTAGAAAAA TGTACTTACTAAAAAACACTAGACAGTCGGAACCACTACATAGAAATGGC AACTATTGCCTCAAGGTATGTGTACACCTTTTTTCCGATTTTTTGTCAAA AATTCTTTTTTCAGTCAAAGTGGAAGAAAAGTTACTGGATTTCATTTTGG TAAAATCGCGATGTTAAAAAATCTTTTTTTGATCCAGAGTTATAACCATT TAAATTTCAAAACAAAGTTCGTCTTATGATGGATTATTTACTCAAATAAT TGTATCTTTCGGAAACAACAAAGACAAAAGAGAGAATTCAGCTGATGTTT ATTCTCACCTGTATTGAATAGTAATATTTTTGATACATTTCACTGATTAC TCAAATTAACAGCAATCATCTCGTTAAAAATTTCAAATTGATGTAGAAAA AAACGAAATTTTACCACACCATACTACTTTTAACGAAGTTAAAGTCACCC ATAACATTTAGATATCGACTTCATTCTTTTTTTATGAGATTCCCAAAGAA TCAAACTTAAAAAGTATCTTAGGATTTTACTTCTAACCGAGTTGTTTTTC CTCAATTTACAGATAACTGAAAAAATCACATGTAAATTTACTTTTTTATC GATATTTTTACAGAATTTAGGATTTAAAAGANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NGGTGACTTTAACTTCTTTGAAGTAGGTAAGGTTAAAATTCTTAAGATTT TAATTATATCCTGCCCAGTTTTTTAAATTCAGCTGAAACTTTTACCATTA GAAACGGAATATTATTGGCTTTCAGAAAATATATACTTTTGATATACAAT GTATAGCAATGTGCCCTCCCGGTTATTACCATAATGGCTTTATGGCAACT CCTGAACTTGGGCACAGGATGTACGGTTTGTACTTTTGATATATAAAAAT TTGTTGTTCTAAAGATATGATCAATTAAGGAGAATGTGTCAAAAAAGGTG AACACATACCTTAACCGAGGCCTTAACGGGAATTATTTCCCGAACGGGAA GGTGAAAAACTTCCCGAAATGGATAGAGTTTCCGAATCAGGAAATTAGTT TCCCGATCGGGAATGTGTCCTCTGCGCACTCCGGAAATTGTCGTGGAAGG TAAATAACTGATGCCTATTGTAAAATAGGGTGAATAAATACCTTTCACCG GGTAGTTAAGAAATCCCCCGGGTAATCGCTTCTTAATTCTACTTTCCCCG TTCCCAATTAAAAACTTTACTATTTGGAAACTTTTTCCCGATCGGGAAAC AAAAATCTGCTTTGTTTACAAAATTATACTTCCCGTTCGGAAACGACGAA AAGTTCTTGACCATTCACTATGGTTAGAGCCCTTAATTGGCTAGCTGTGG GGTCAGCCCCATAATACATGTACATGGGGTGAGGGGGTCTCATTTTAGGT TCTTACGTACGTACTCACCATATTACGATTCAAGAATTCAATTTTTAAAA AAGATGGTTAATCTTTATTTATCAAGCTCACTAATCATTTTGAACTATTT CTTTACTTTTTAGCTCATTCTTGTGGGATGCCGGGCTGTTCTAAAGTACT CATTCTTGATGGTAATATGAAAGCGTGTCGTCAAGTTTGCTCTGTTAAAG AAGTTACAAGAATGGGTTTCAAAACAATACCAGGCCAGCTCATCACTGGT GAGATCCGTTTTGATTTTTATTCGTTATCATGCTCTGTATTGTATTTTAA ATCTTGAGATTTTAATTGGGTGGCCTCGAGACTCCCCCAAGTTGCACGAA GGGTGGGTCTTTGTTAGTAACAAAAGGAAAATACATTTAAGTCTGTCTCA AAATAATTTGCAGCTGAGACAAAAATCGCAGTAACTTTTGATAGAATTCG AATCAAGTTACGATTTTGTGCTCGTTGAAAAGATATTTGTGAGTGAAATA TGATGAAACAAAAAAAAAATCGGAAAAAAAGAAAAATGAAAATAAAAAAT GAAGAAGAAAAAATTCAACTTCTTGCAGAAATGTGGTATGATTACCATTT TCACAGGAGTGATTTTTCAATCTTAGATAATCATAACTGTGGAAAAACTT TTCAAAAATATTCATTCAATCAAAAAATATCAAACTTGTTTGAAAGGTGG AGGAGGTTTGGCAGTTTAGACTATAACGAGCATAAATCGATATTTACCGA GTGATTTCTTGGGACATTTAATCAATGAATACAAATAATTGGTATTGAAT TTCCATATATCAACTTAGTTTTGCTCTAAACTTTCTGGTCTTAATACGGC CCATGTTATTTTATAATTTTACTTATTATTGTCTTATTCGATTTTCATTG ATTCAATTTCAGTATCTACCTTATCGGTAGAATAATCATCGGTGAAAAGT GACAAAAATTTTACCGAAGAATTATTGAAGATGATCAATTTCAGAAGGGC TTTGATAAAAATCATTTACGAAATTATATGCCCGCGATTTTTTTCATCGA CAAATTATTTTAACAATAGGGTACAAACAAATACTCTAGGGGCTGCTTTA GTTCTCGTATGCACATCGGCGTATAGTCATTTTTTCTTTTGATCATGAAA GTATAGTCCTTGAAGAGTCAGAAAACGTGTGTGGCGTTATTTGGATCAGG CACAAATTTCCATAATGGCGGATTTTAGATTTTCAATCCTTTTTAGCCCT CTTGCTTGAAAAATATTTTTTTGAGCTTAAAACCCTGCATACTATATACC AATCGATCAGACATTTTATGCTGATTAAGATCTCGAGCTATGAAGTACTT TCGTTTTCAAAACATAGAAAACGTAAGTACACGAAGTACTATTATCTCTT GATAACGAAATTTTTTCAGACCATGGTTCTGACCTTTTTCTTAATCAGCA TAAAATTTCTGATCGATTGGTATATAATATGCAGGGTTTTAAGCTCAAAA AATATTTTTCTTAGGCTAGCAGAGCCTAAGAGCCCATGTGACGAAAAAAA ATTTTGAATCCGGCATTATGGATTTCGAAATTCATGTAGAAAAAAAACTT TTCCTGAATTTTATTATTTGAACGGTAGGCAAGACCCTCCGAAAATTTCA AGTAAGGGTTGAAAATCTAAAATCCGCCATTATGGAAATTTGTGCCTGAT CCAAGGACTATACTTTCATGATCAAAAGAAAAAATGACTATACGCCGATG CGCATACGAGACCTAACTCAGCCCCTAGAGTAAATAGATAGAGGCTAGAA TGGAATCTGCATAATTAAAGTTGCGGCCCACGTGGCTTTATAACAAGTGA CGGATTTAAGGGTTCTGCACATGCCCAATTTTTCGATTTTACACCAACTT AAATGGCAATTTCTGCATTTTAAAAAGATTAATGTATAAATTTTTTTATA TATTCTGTTAAACCTACCTTTTTAGAATTTAAAAATCGAAAAATTGAAAT GAAAAAATTAAATGAAGAAGAAACAAATAGTTTTTTCGAAGAAGAGTATT TCACCTTTCAAAGCCCTAATCGCGGTAAAAATCAAACATTTTGGGCTTTT TATTTATTTTATTTATTTTTGGTTCAGGTGATGTATCTATTTAGTATCTA AAAATATAATTTCGGAAAATTTTTGTGGAAGTATCTTTCCTTTAAAATCT CCAAAAAAAACTCATTTTTGGCAATTTTCTCCACTAAATGTCCATACAAA AAAAGCTATAACTTGGGATGTAGCCAAATAGAAACTTTTTCCGAAAAAAT GTAAATAAAGAATTTATTTGTCATTAACGTCGTAATAGCGTCGTTATGAC GTTTTATTAAGGTCCATGCCACACTTATTCCTTAATTACTCATAATGTAA TTACTTAAATTCATTTTTTCAAAAGCAGTTTGTTCTAAAACATGTCAAAG AAGCGAAAACATAAGATTTTATCTTCAAATCCTAAAATTGATTTTTCACT ATGACCAGAGCCCTTAAGATGGTGCTTATCCCCTGATTATCGCTAGATTT CAAAAGAAAGTTCATTAAAAGTTAAAGGAACGCTTGTCAATCATTCATTC TTCAATCGCTAAAATTAGTTAAAACCTGCTGCTTTGTCTTTTCCGGGAAA GAGAGAAGATTCACTCTTAGCCCTTCAAGCTTGTACTTAATTGCTCGACA CACTATTCTTCGCCACGGCATGATGTCAGAACTGGGGTACAACAGAACAC TTACTATGTGTTTTCAGTAAACATAATCTTTTAGTGAGTTAAACCATAGT GTTTGTTTTACCCTCGAAATTATTAAATCTCATTGGTTGAAAAAGGATGT CACATGACTTTCCGTGGCAAAGAATTGTAAAAAACCTATAAGAAAGAAAT TAGCATCGGCATTAATTGTCTTTTGTTTATTTTTTTAGGTTGCATGAATA CACCAAGTAAGGGTTTGCGTGTCTGTGAAGAGCACAAAGAAACGACAGCG TTAGTTCATGATGATTCAATTGAAGAAGAGATGGAAGTTGATCGAACTGA AGTCGAAATGAATCTAAGTCAAGGTACCGTTGATGAAAACGTTGATACAA ATGAAAACGATGATAAAAATGAAAACGATGATACAGATGAAAACGATGAT AAAAATGAAAAAAGTGATTCTGATGGATTTCAAGGAGTGATTAAGATTTT GGATAAAAAAGAAACAAGAAATTCTAAACTGTATAAGGTAAATTACCATG ACTGATTTAGACGAGTGTGTTTGTGTTCTGTTTTAAACGTCCGGCTGCGT TTCTAAACGTCCGGCCGCACGTTTGGAAAAATCACAAACGCTAGGCCGCG TGCTTTAAGCGTCCGGCCGCATAATCACAAACGTGCGACCGCTTGTCTTA AACGTCCGGCCGCGTATCTTGAATAATCTTAAAAGTGCGGCCGCGTGTAT TAAACGTGTCGCCGCGCATCTTGAAGAATCTTAAATGCGCGGCCACACGT TTAAAACGCACAGCCGAATGCAATTTTTTTTCAAAATTCTCCTATAACTT CTATATAGAGACAATACTTTCCTTTTTGAGCGTTCTTTCTGTTATAATGA ACGTTATTATTCTGAATGTTACTGAAACTCCAAAATGTTCTCACATTTTC TACTTTTCCCAAAATTTTTCCAAAAAAGGTACCCTACGAGGGACTGATTC TTCTATTTTGGTCTTTTTGCAACCCTACCTGGGACTCGTGGAGGTTAAAA AAGGTACCCTGACCAGCGGCGCATCCCCGTAACCCATTTTGCCCTAGTAC CCCTCTCGGGTTAATAGCTATTTTATCATTTTTTTCTAGATTTTTTACTT CAGATTAGCTTTAGTATACTTTATTGGCTAGTTGTAATCATATATAACCT TTGACTTTGTAGATTCTTTGGCACACAGGAAAAACAACGTGGGTTAGAGA TGAAAAACTTTCAAAAAATCTTCTGAGTGCAAATAATAAAGTCGTTATAC AAGAAGAAAATTCACTTGGACAACCAAGACAGATTATCAAGTTTCAAAAG AATTTGACCAATACTCAGGAAGAATTGAATGCTTGTGAAACTGGGTTAGT CTGTGGGTTATTGATACAAATTGAAGCAATTAGAAATATCCTTTTAATGG TGCTATTTGGTTATAACAACATGGGGTGCTGTTGATTATTGGAGAGTCTA GTTACAATTGTGGGAGGCTCAAGGTCCCCCTTACAAATCTCAAGATTGAG AAGCACTATAAACTCGACCAGTGGTGATAGATAATTGAATATAATTTCCA TTATTTTTGGTTTGGCCACCTGTCTGATTGGTATTTTACAGGCCAGAGTT AAAATTGTAATTTGACTCATTCGAATTGATCATAGACTATGATTTGATTG AAATTCGTTTCTGATGGGTATTTTGCCAAAAAAAAAGATTAGTTATTGAA CAATTTTGTCACATGAATATTTGGTACTTTGAAGACCGGTCTGTAAAATA CATGTCAGCCCCAACAAAAAATGCTGACATCAGCAAAACTTGTTTTTTGA ATAACTCCAATAATACCATTATAGATTTGCTGGTTTTGCTGTAGAGGCAG AAACATCTGAATACATTACAGAAGATGGCGAGACAAGAAAGTTGAAATGT TCCACAGAAAAATCAAAACATAAATCAAAAAATCGAAAAACAGCAGGTAA ATACTTGTACTTTCCCTCAACTTCAAATAAATCACATTTCTTGGATTTCA TGTGAAAAGAAAAGAAGATTTTATGTCAACCCAAAGCATTAAAGCTGCAT CAAGTCTCCAGAAGAGAGCTGCATGTCAGAAGTCATTCTGACACAACTCT CCTCTGGAGACTTGATGCAGCTTTAATACTTTGGGTTAACATTAAATCTT TTTTAACATGCACGTAAGGCTGTCTTTTGGGAATTTCCCCTACGTGACCT TTCCTTCCGCTCAAAACTTTTTGAACGTAAGCAAACTCTACATAAGGCCA CAAAACACTACGTAAACTTAGGGAAATTCCCCACCCTTCAAGGTCTTAAG TAAAAATTTACGTACATGTGAAAATAGCTTAAAGCAATTGGTTAATTTCT GACTTTCTTTGTCTTAACGAGCCTAAACGTTTATATTTTGAGATGAAGTA TTTTTCATAAGCACAAATTTACCCAAGAGTTTTGTTTTGAGAAAAGTATC TTCCCCTTGAAAATACATTTTGCATCAGGAAACAACAACATTTTTATGCC CTTTTTGTTATATGTTGTACTTTTTGTCCATAGGAGTTTTGGTCTTTACT ACGCCTTGTGGAATTGTTCTGAATATTCGAGAACTATTTAATAGCGAATC TAAAAGTCAAGTTTACGGCCACCTACACGACATGTTAACGATGGAAGAAT TCAGCGAAATTGGTATTAATTTTACCATTTCTATTCGTTGGAAAATGAAT AGCACAGTATAAGCATTGCATTTAATATATACACTGAAAAAACATCGCAT GAATATGTGGAGAGTAAAGCACTGTATTTCCATTGTTACAGAAAACCTAA CTTGCATACTCACATGTATTTAAACTTTCAGCCAACAGCCATTTTGTTTA TAAATGAATCTTAGAAAAATCCTCAAAATCTTGGAAGACAAGGATGGATA TCATGAATTGAAAGATTTTCTTTTATTTCAGAGCTTATTTGCTACGATGA TGCTTGTCATTTGAGAAGATATTCTGAGAATCCGATCAGAAAGGATTTAA CCTTAACAAGCAAAAGGATTTCATCTATGGAATTTTACATCGACAGATTC CACTATAAAAACCATAAAGATCCATGGTGCAGAAGAAATTGCAATCCTGA TAAATCCAGTCTGCTCAAAAATGTAAACATTTTTCGGTATTTTTATCATT TTGTTAAATAGATACCCTATTAATTCGAATAGACGCCCCCTTCTTTTAAA TGTTCCCCTCGAATAAACATCCCTTCTTAAGAGAAAAATTTTCAACAAAC GTTCCCTCAAATGAACACCCCCTCTAGGATGGATCATTATTATTTATTCT AGAATTGTTTGAAAAGGAGAAGCATATAGCGAAAAACTCGAGAATGTGCC AATGATTGTATTCTTTCAGTAATCAAACTATTAGACCTTTTTCATAAATT ACGTCAGGAAGCATCACTTGGCTTGTTTTGAAATTATTGCCAAAGTGATT AACTCCCAGCGGATTTTATTAAAACTACTTTCTATTCATAATATTTTGCT GCTTAATAATTTTTCAGGTTAATACAGAAGCATGTGAACAATTGTTCAGT TGGTTTTCAAGATATTCTCGCATGACAAAACATATGAACCGCCAACGCTT TTTATTTCTCACCCTATATTTAATGGATTTTCATAATGAAAATATAAAGA ACATTCATTGGAGAAAGAAGACTTAAAGGACGCGCATCCAAACCGAGTAC GAAGACAATATCTTACTTTAGAAATTTCTATCAGTATTATCCTATGCACA CTGACAAGGATTACTGATTTTATAGTGTTTTATCTTCTTTTTTTGTTGTT GTTAGAGCACTATAATTTGAACTTAATTGTGTTAAAAAACTCTTATAATT ATTCTAGACACCTGAGCAACGGTTTAAATAAATCAAATATGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068730TCONS_00068730Clytia hemisphaericatranscript
TCONS_00068729TCONS_00068729Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068729-proteinTCONS_00068729-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_489supercontigscaffold_489:20169..30661 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.13 0.04 4.13 3.75 0.63 0.53 0.4 0.28 0.03 0 0 0 0 0 0 0 0 0 0 0 0.32 0.13 0 0 0 0