XLOC_043021 (gene) - C. hemisphaerica

Overview
NameXLOC_043021
Unique NameXLOC_043021
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_492:139993..144317+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043021 ID=XLOC_043021|Name=XLOC_043021|organism=Clytia hemisphaerica|type=gene|length=4325bp|location=Sequence derived from alignment at scaffold_492:139993..144317+ (Clytia hemisphaerica)
GTTGTTACATGGGACCAGGTATTTTTGAGGGATGCCAACAATTGTATGAG
CACTCGATCACTAATCATCATAAAAGTGCCatcgactttttgaaaaaaga
ccaCCCTACAGTGATTAAAAAACTTGTAAGGCCTCCAAAACATGCCAGTG
AACACATTTCAGACTTTTATAAAGATTTGACAAGCGAGAAAGGAAAGCAA
GTGTCTTGTATGTTTTTTTGGGATCCTACATTTGTGAATGAGTTTCAAAA
TGATCAGCACATTAGAAGAAAGTCCACTAAAActttgttttcagaaaaaa
agctCTGGAAAAATTGTAGCACTGAATTAAAACATAAAAACTGCTGCAAG
TATGAGATTTGGAAGGAGAATCACCCACAACAATATAAAGAAATATGTAA
TGAAAGTAAATATTATTCTGCCCAGTCTGTTTTTGTACCATCAAACAAGC
AAAAGGTTTTAATACAAGGTAAAACAATTACCATTTCTGGTGGAATTAAA
TCACTTGATCCTCCCTGTTTAGGTATTGCCTCCACGATTGGTTCTCATCC
ATTCACCTGTAAAAACTGTTTCGGCCAGAGAAGAgctttgaataatttga
aatctTATCGTGACAAAACAGCATCTTATTCAAAAACTGAGTCTCGTGTG
GGTAAAAAAGGAATGCGAGAGGATTATGCAACGAAAACAGAAAAAGAACA
GCACTATCAAGAAACTATACAAAAAAATGAAGCCCTGACCAAATCTAACG
TTGCATACAGGAAGCAAATATTGAGCAAAAGCAATTGGCAAAAAACACTT
TTGGAGAGCTGTCAAAAAGATGAAGTGAGAAAGCTTGTCCTTGACCTGGT
TCTTCTAATAGAAAGCAAAGATAATACCCTTGCTATTAAGAAAGATATCA
TAAAAAATTTGTTGGGGAAATTGAGAAGTGGAGTGAACCACAAATTTAAG
CCTATAATCAAGGATGTAGCCTCCTACTACCATAACTCTCTTGGGCCTGA
CAAATACAGTTTACTTAAAGATCTGTTTGGCCTTCCTGGTAAAACTTGTG
CAAAGGAGCATGGCAAACAAACTAAAATAGAGCTTGGAATGAATACAGAG
GTTTTTGAAAGAGGTGTGACCCTTTACCAAGGTTACCCGGTTGTTGATGC
CACGGATGAAGCTAGAACTCTCAGGATGTTTTCTGGAGTTGTTGATAAGG
ATGGAAAAATAGAAATCATTGGTGAATGCTGGAAACCAGATTATAATGAA
TGGAAGGAATCAAGAAAGTTGTTAGATGAAATTCTCGATGAGGGGAAAGA
TTTTGTAGATGAATTTAGTGCTCTCAAAGGCTATGTTGACAAGGCTATCC
AAGAAGACAGACTTGCAAAAAGCACTGGGATTCATAACTTGATTGCTGCA
ACAGGAGTCAAATCAAAGCCTTTGATTTATATGGTATGGCCTACACCTAA
TTCTGGGTATCGCTCATGTCATCTGCTTAAAATATGGGATGTTGTCAGGT
CTAATTGCTTTCTTACGCCATCTGGAGCAATGCGAAAAGATCCGATCAAT
TTGATCGGACACTCGTCAGATTCTGCCGGATTCCAACTGGCAGCTGCTGT
TACATTGATGACACCCCAAAGCCAGGCACTAGCCACTGGTGTGAAATATT
TGACTCTTGGTGCAGGGGAAAGTCAATTTGCAGCTCCATATTTTGGCCCT
CTTCCATCCATTGCCTACTTAGATTATGATCATAACCTTCGGCTTTTTCT
TAAGTGTTTGAAGTATGAGACCCTTGATCTAGATCTTTTTCCTTGCCAAA
CTAATTCTTACATTGCCTCAATCAATCATCTTCAGGATTTAAAGGTCACT
CTTGAGGAATGTGGCAACTCTTATCTCTGTTCCTTTTCCAACAATGACTT
GCTTTTTGCCCGGTTCCTTGATCAAAATTGTGATGCAGCTTTGAAAGTTT
TCACCAAGGGTGTTGCAGAGCTTCTCCATGAACATGTTCCAGGGTCTTCA
GGAACATGCCTTTACATCGAGGGTGTTGTAGCGCTTTTTAAACCTTTCCT
CCATCCTGAGTGCAACTCAGTATCCACTCAAGAAAGCCTCAGCGAAGGGA
TTACTGTTTTTCGAATTTGGaagcaaattttgaaattaaaaggcAAGCGC
TTAAATGCAGTGAAAAATGCTGCAAAAGATCCTTCTAAATGTGGTAGATT
CCTTACTTATGGTTGTGCAAAAACAGCAGAGATTCTTTTTGCTGCTGGCA
CATGCCATATGTTAGCCATGTATGCTCATTTTAAGGACCTTGGCACTTCN
TGTGGTAGATTCCTTACTTATGGTTGTGCAAAAACAGCAGAGATTCTTTT
TGCTGCTGGCACATGCCATATGTTAGCCATGTATACTCATTTTAAGGACC
TTGGCACTTCTATGCTTTCTCTTTCCAATTGTGGAACCAAGACGACCGAA
AGAATAATAAGTGAGATTCTGGGCAAAACAAACCAGATTCAGTCTTTGGA
TGCACAGCCAACACTTGCAGGGATAATGGAAAAGATATCCAAAGTGCAAT
CTAACCATACTGCAGAGGACAACATGACAGCTGCAGgtgcaaaaaaacaa
agtaGTACAAATAGGCGAAGGTTATCACACAAGCTGAGAATTGCTGAGGC
TTCAGACTATGAATACCCAGAGACCTTCTGTGATTTTAGGAATCAACTAG
AGGAAGCATATAAAGTTGGAGTAGAGAAGGGAAAATCCTTATTCAGAAAG
TACTGTCCTGAAGGAATGGAGTTTTTGGAAAAGAATGGTGGTTTTAATTT
CTCCCCGAGAAAATTTCTGTCCCAGATGAAAACGTATTTTGTGGAACTAT
AAGTGAAGAATATGCGTTAGAGAAATTAAAGGTCAAGTCTGCTGAACTTC
TGTCTAATANGGTATTTTGTGGAACTATAAGTGAAGAAGAATATGCGTTA
GAGAAATTAAAGGTCAAGTCTGCTGAACTTCTGTCTAATAGTGCTGTGAA
GGAAGAAAATCTTGTGACCAATTATTTTAACCCAGAGGATATTAGTAAAA
CTTTTGATTCTGAAAAAGGCAAATGTGAAAGCGGCCAGGAAGGTGAAACA
GGTGAGAACCTAAAAACTTGGATAAAggtgaaaattgtgaaaaagagAGG
AATGTTGAGaaagttggaaaaaatcttATTTCTGATGATATCCTGGACCA
CCTGGAGTCTGATGATGTTGAAATAAAGGGTGCAGAAATTTCAGATAAAC
GTAGATGGCTTCTCTCTAGAATTGTGAATGgggaaaaaaaggaaatacaT
TTAGCACAGGCATTGAAACTTCTTGTCCCAAGAGAATATGTTTCACGAGA
GAGATCAAGGAGACACATTGCTGCAAAATTTTTGCCTGATAGACATGAGG
TGGACAAACAGCACAATGTTTTTGCTTTCAGATTTGTGGTAGCTAAAGTT
TCTGGAAAGGTTGCCGTTTGTAAGGTTGCTGCTTTGAACAACAATGGCAA
GTCTGTTAAAAGTGCGTCAAATTTAGATGAGAGCGTAACATGTCAGCTTA
TCCCTCTTCAAAAGCTGTCTGAGGAAAAGAATTTGTACATACTTCCCAAG
AAGATCGTTGTGAGTAATTGGATTAAAGTTTTGAATATCAAGGGTGAGTT
GAAAATGTCATGCAATGAAGATGGTGAATACAGTGTGATAGACAAATCAT
TGAGTGTTTTAGAAGCAGCTGAAGATTCAGATCTGTTGTCTGAGGATCTT
AAGTGTGCCAAGCAGCTTTCTAACAGCTTGCCTCCACTAGGTTTTCATGA
AGTTAATGAtgttattgataaaaaactagATCCCAAAACTGAAGAATACT
TATATCTTGTGAAGTTCAAAGGAGAAGAACAAAGTGATCCCGTCTGGCTG
AGCCAATCTTGTTTTGATCGGCCTATCCATTTTTCAAAGAGAAAGGGATT
TGCATCTGAAAAGGTTTTTGCATGTGATGAGTCCTTTATGAAATTTGCTT
TGAATGCAGAATCTCCTTCAGTCAAAGCAAAGGCCCCCCAAAAGCGACAG
TCTAAAATGCCCTCTGACATAAAGAATGCTCTAAAAAGAACTAAAAAGCC
AGGAAATCCAATGAAGAGAAAATCCAGTCCTTCTTCCCACATTccagaaa
taaagaaaaagagagTTCTATCTGTGGGTGAAACTTCAAAAGCAAAACTG
GAAGCGTTTTCTTTTGTTAGGACTGAGGACCAGAAAAAATTGGTGATCGA
TGTAGATCTTATCATGGTGGACCgggaagaaaaaagttttacaactgaca
aagaaatttttaaagtcTCATTANN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069035TCONS_00069035Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069035-proteinTCONS_00069035-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_492supercontigscaffold_492:139993..144317 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.89	0.74	0.47	0.37	4.09	3.34	4.17	4.87	3.86	3.52	5.75	3.79	3.02	5.47	2.61	2.78	2.76	3.37	1.25	1.8	3.21	2.54	0.98	1.47	10.82	13.26	0.66	0.73	0.81	0.86