XLOC_043057 (gene) - C. hemisphaerica

Overview
NameXLOC_043057
Unique NameXLOC_043057
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_493:156950..160443-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043057 ID=XLOC_043057|Name=XLOC_043057|organism=Clytia hemisphaerica|type=gene|length=3494bp|location=Sequence derived from alignment at scaffold_493:156950..160443- (Clytia hemisphaerica)
ATTTGGCGATCTTTCTCTTTTTAAATCGTGCAGGTCGAGCAAACCACCTG
AAACGTGTTTACGAACTTGAAGGGTTGATGTTGGATCTGGATGCTCATTT
GAGAGGTGAACCTCAGAACTTGATGCAGATGAAACAACCTGCCACTGATA
TCTTGAACTCTTCCGTTTTCGATTATGACCAGGGAAGCAGGTACGTACTT
CATGTCTCACAAATATTGATAATTTTGACTTCCAATCTATGTTGAAATAT
ATAGAGAATTTCGGTTATTATTTCCTCGTTTTTGGAAATTTGAAGTTCGG
GAGAGAAAGTCGCTTTTTGGCTATCTATTAAATGTAATCGAATTTTTTAA
TTTGGATGGGTTTTATAGACTTCCAGGCTANACTATCTATTAAATGTAAT
CGAATAGTTTAATTTGGGTGGGGTTTATAGACTTCCAGGCTATATTTGGA
GCTTTATTGGACCCTTCTTGAACTTTTGGATCTTACAGTTAAAGCTCTAC
ATTTCCAACCTAAATGTTAGCGCTTCCAAATCGTTTGTTGCTGTAAGATT
TCGTGGGAATTCCCCTTTTTTCTCAAATATTATGACGTTGATTGCAATTT
GACCCAGCTCAACCGGAACCCAATCTATTGTTGTTAAGGTGGATAAGAGT
TTTGTTTTTACCGTTTTATTTTAATACGTCAGCAATAGAATACAGCTCAC
TCTCACAAATTGATGATTGAAACGGGAACCTGATTTTTTTCGAAATTACA
GAGAGATTCAAATCATAAGAGGTGTTTATTGCTGACCTTTGCTATAAACT
CGCGAAATTCTTCAAAATTACTTTTTGTCAAATTAAAGTTATTAGTTGAT
TCACCAAATTGTAACGCCCACTAGCCAACCAAAATTTCTCGTCTCGGAAG
TTTTTCTCTTAAGGTAATCGAACCTCGAAACAGTAAGAGCCCCAATTATT
TTTTATCTAATTGTAGATGTGAATTTCATGAAGACGAAACGAACGAAACG
GACACAAAACATTGTGCTCTTGGCCAAGCTAACCGATACTGGTAAATTCT
TATTTTGAAGTTAACCTTGTTCTATTTGAAGTTTTCCGAATGTAGACGGA
AACCCGTTTAGTTTAATGTTATTACAACGATATAAGTCGTCAGTCTTAGA
CCCTGCTCGGACTTTACGGTTCCGTATCGTTCCGAAATAAAACGATTCCG
AAACGTCAAAAAGGAGAACACGTTACAAAGCAAAACAGACTGAAACGGTT
TCGCTCCACTATTTTCATCGGAACGGAACTGCTCCGTTTTCTTGCTCCGA
AACGTTCCAAAACCAATATAAACACTCTTGATCCGTAATGGAAACCATAC
CGGAGCGATACGAAACCGTAACGTCTGAACATGGTCTCAATAATGACCTT
TCAATCAAGGAATTCCCAAACAGCCTGAAAAATTGGAAGTTAACAATGTG
CGATTTTTAATGATGAGTTTAATTGCTTTTACTGTATATGGCATCAATCG
TGGGAATACACTTTTTTGAGCTTTTTCCTTTTCTTTGCAATCACACTCGA
TTCTGCTACTAAAGTTCGATGTTGAAAACTTACCCATTCCTTCTTACCCT
TTCCTTGACGTTTTTTTTGTTTTCCTGCAGTTTCTGTTTGGCTGATTATT
TTTGTACCAATCACGAGATCCAAATTACAGACCGTCATTTACCACCCAAA
CAAAATGACGTCTGTTATACCGTCATCCCAAGCAAAGATGCCGTCAAACA
GCGAAGACAACAACAACAACAACAAATGTCGCCTCGATTCCAAAATGGCG
GAGGAGGCGCGACTTGGGGTGGAAACAGTGCTGGCGGTTATTCAACACCT
GGTTCCAGTATAGGAGGTTTCACAACTTCTGTTTGCTTTGCTTATTTTTT
TGGGTTTTATTAGGTATCAGCACCAACCTGTATGAAAAGCTTACGCTGAG
TCATCCGCCATGTTTTATCGGAATGTTTTTTATTAGCACCCTAATGGTAG
CACTAAAAACTCGATGTGTTTCGTTTAACCGAGATAAAGTACTTTTGTTT
TCTCTTTTTCTGTTTCGTTTTCCCGAAAACTTGAGAGTAGAGGATTTATA
GAAAGCGGTAAGATTCAAAGGGGAACCACAAAGCATATGTGCAAAACTAT
GGATTTTTTTAAACACATTGTATTTCTTGCTCTTACAACCAGGATCTGAC
GATTTAGCGGCTCGAGTAGCAGAGAAATTACGTTTAGAAGAGAACAATCG
AATGATGGCCCATCAACAATTCGTAGATGAAGAAGAAGCCGCCCGCACCA
AGGAAGAGGAGCAAAAAAAGAGATGGGCGGCATTAAGGGGAAGCCCTAAT
AAGCAACAAAACAATGCCCAACCCTCGAATCCACCACCCGCTGCCTCTAG
GGGTAGAGGGCGTGGCCGAGGTGCAGCAGCGATCCAAAATCTTAGACGCC
CTGGAGAAAAAGCATCAACAAGCCCAACTATGGAACAGCCAAATGGTTTT
TCTTCAAATCCTTCCATACGCCCGCCGCCTGGATTTTCAGCGGGTCCACC
GCCCGGGTTTAGCGGAGCCCCTATCGGGCGTGGCCGAGGAACCCAGCTTC
ATATACAACAAATAGACAATACAATCAATAGTCAAGATGAGCAAAAATGG
GCGGGCTCAACACGCGCCCCTAGTGCAGCAGAGGCACCCCGCCCACCACG
TGCTTGGATGTCCTGAATAAAGATCTAGGCCATATTAAGTTATGAATGGA
AACGGAGAAGCATTGTGTTTTAAAGATGAAAGTCTTTTGATGGCTTACGA
CGACTTGACTATTTAGCATCGTATTATAGTGTATTATATTATATATAGAC
TCCCTCAAAACTGAAAATGCATTTTTATTTTTTGTTGATGTACCATTAGC
AGATAGTCCCCAGATAGTATACTCAAATCTTGTATTTGAACCTTTACATC
TATTCAGCAGTTTATTATTATTTTCCCTCGTCCTATTTTTCTTCTACCCT
CCTTTTCTCACCTTTCCCATCTCTAACCCCTTACTCTCGAGTGTCTAATT
AACACAATTAACCTAATCTTGGTCATCTGAAAATATTTTCAAGAATTGAT
AAAGGGGTTTGGGTAAAATCGAAAAATTAACAAGCAGGCTTGAACACCTG
AGAGTTAACCAGTCTACTTGAGAGTATCCTCAAATTCATTAAGCTTTTTC
GGTCTCTGATTTCTTCCAGTATGGAGTCGAATTGTCACAATCCAGAAGAT
GTTTTATCACATTAGCTTGAAATTTCTAACCCAAAAGTTAAAGTTGTTTT
TAATCTGAAAGTGTATTGTTTATATTTTTATTGATTATTGATTTTTAAAA
TGACACCACAAAGCTTTAACAAACATTTATACTTTTGACAAGATTTTCTA
TAGCATAAAGTTTTTGCTTAGATATTACATAATATACCGGGTGACCCACG
AAAAAGTTCGGACGGTTTTCGTTGGCTAGGGTCTGAAATAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069098TCONS_00069098Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069098-proteinTCONS_00069098-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_493supercontigscaffold_493:156950..160443 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45	41.42	13.12	10.05	25.35	18.03	22.47	24.25	13.54	19.12	15.64	10.9	12.79	11.75	11.58	14.29	18.75	14.83	11.94	13.98	15.02	17.07	44.11	39.86	18.01	18.29	25.23	25.05	42.86	45.44