XLOC_043107 (gene) - C. hemisphaerica

Overview
NameXLOC_043107
Unique NameXLOC_043107
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_495:172385..176837+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043107 ID=XLOC_043107|Name=XLOC_043107|organism=Clytia hemisphaerica|type=gene|length=4453bp|location=Sequence derived from alignment at scaffold_495:172385..176837+ (Clytia hemisphaerica)
ATTTAAACTAAGAAGACGAGAAGAGAGTTGCTGAGATATTTATTAAGAAT CATTTCTTGAACTTTGttcttttttctacaaaaacatGCtagatttATGT ATCGACCCAAATTCGGATCGATTAAATTCAGAAATGTACTGAATCTAGAC TTGACGGAGGATTAGATAATGATGTCGTACGGCTAGTTAACAGGAATaat taaaaaacattaaaaacccTTTGTAAAGCTCACccaagaaataaaaacaa ttttaaccaAGGCTTTAAGAATATGGGGAGAGAAATTAGATTCacaattt gtttcattttgatatttttgtcaaCAATACAATCAAACCtggatccaagc cacgatatcAACACAATCAATACCACAAGTGAAATTCTTTATGGAGTACC TTGTCATAAAGATATTGGTAAATCGTCTGCCGTGAATTTCAACCATAATT CAGAACGccagattttcaaaaaggataaaaagtaatttgatttttttgtt actgtccccatctttgctgaaaacatatttttgtttgaaTGCATTCATTA CATGTTAAATTTAGGTGAATtttggatcctaacctaaaAAAAAGATTAGN TATTTTTGTGTTTGAATGCATTCATTACATGTTAAATTATGAATTTTGGA TCCTAACCTGAAAAAATCTTCTCTGGTCACAAATATTTGACATTCATTGG TCTGTAATAATATTCGTTGTTTTACTATTAAGGTACACATCTTCACAATG GGTTATGCAACTTCGTCTATCAAGCATTAACACTGTGGTCAACTCAATGC TGGTCATTGATAACAGCACCGTCATTGAAATGTTTCTTGAGTAAGCTTAC TTTACTTTATTTGATATGCCCAAAAAATAGAAGTAAATAAAATAAAGGCT AATTTCAAATTGTTAATCTAAATGAGAAGTCgcgggaattaaattttgcg aatttaaGGGGTTTcattagcgagcacctcaccaaaaaccagcatttttc actttttcagttccactttgatgattttcgagaaaaaaatgtacttttca aatattttttttgacgCAGATTCGATTTTTCCCTACTGCAAGAGCTTCGG AAGTTTAGAATGACGTCAAAAATCGAGTATTAGAAGCATTTGAAAAGgcc gcaaagtggaatagacgtgtTACTGCGTagaatgcgtgaatgcgtaaatg ggctttttcacttgcttgaatgcgtgaaaataaaTGTATCAGATAAGGTT TCATATAAGAAGTACGAATAAGGTCTATCCAAGAAATAAAAAACAGTCAA CAATTAACAATCACAGTTTGGCGGTGAAAGTCCAAATCATTTAATGCGAT agtcattttcttatttttcagtaAATACAGAGTCACCTCTCTGACCAACA CAACTGTAACCACAAGTAAATTGCAATCCATCTTCTCACACATTTATGAC ATCTCAATAACATGTGCATCATCAACTATCAATGAAATCGCTGTAAAGGT TCAACTAATTGACACCAAAATTATTGGCGTTAACCATAAACATATCCaac caaaaaagtaaaaacgttTTTCATATATACTATTAACGCTCTCTGATTCG TTTTTCAAGgcgaattggattttcatcgaataagggaggaTATTGAATAG TacagcgtcgtttatgagagtttctcgtTGACGGTAACTTTAATCACCGA AAATAATGAAGTGTATTGAAAAGTAGAACATCGAATAAGAGAGTGTCAAc tataatataacaatagcgttcagtttgaggtcgttgttgttattttctgc ccgcgtagTTTGATTATTCGCCCGAAAGTGTCTTTTCGCAAATGGCACAA GAAATTTCACAAGAAATGGCACAAGAAATTTCAGtttcgtattcttatga aattgttcttataaaaaacgtgtaagacaaggcacggatgtcactctaag tagactgtaaatcactcccttgtcacatttgttagcatttgaaagaattt tgtctcagatgagaggccactcttaacaaaaattactgtagggctatcat tccttttgaacgcaaattcaactctatgtgttcgttttgatgcggtggca ccttaatggaAGTTATGGCTAGTAATAGCATTTAATTCGTCAAAAAGAag gaaaatattgaacaaaCAATTTCTTTGTGGCACTTACATTAATTAGAAGG TGAAATTCCTTANAACAAACTATTTCTTTGTGGTGGCACTTACAGTAATT AGAAGGTGAAATTCCTtgtcttttttaattcaaaagttCGATTCTTTGAA GTCACTGTCCAAGTTTCcgtattaatttttttttcagcgaGCATTTCCTT CACACAAGCCCGATCGGGTACTTCACATCATTTTATTATCCGTTTGGATA CAAATATGGCAGCCGAGTAGTGcacaaaatcaaaacttttggaaaacACA AGATAATTCACATCCATTTTATGGACGTTCAAATGACACAATATGGATTT GTTTGTAGCAGCCATGATGATAATCTAAGGATTAGAGGTTGGTTAACTAA GGTTACTATTCTAGACgtcagaatctcaaaatattattttcaattattgA AGTAAATGTAATGACTTCGTTGATCCGatcatttttcacaaatttttgcc atCTTTGCGAAAATAAATCTCGCGAAATTGTACGGAGAAGTTTCTACCAA GAAACCATATTATGAGTTTTTAAGTTGGCATTATGCTGGAAAAAGACATA TATTTTAGCaatgaacggataataaaccatttactTGAACTCAGTCTCAT GCAATATGAAATAAATTAGGCTTCGAACGCACGCAGGCCAAATATTTTTG CGCATTATATTCGACCCgctccaataattttttattagttGCAGTATAAG CTTTCCGTCAAGTAAAGATATCTCTTGCTGAATTTCATCACTTGTGTAGG AATTTGTCCGACTTCAAGACGTCAAAAACAGCATGAATGTTATTTCCGTG GATTACGTGGGAGCAGTAAGGTTGTGTTTTTATCACAGCCCAAACAAAAC CAATgtgtaaaaaattgaattatgaaATCCTATCAATTATCAACAGGCTT TTTCGATCTTTTCTAGGAAGCGATCAACTTGATGAGAGGTTTGAATATGC AGATACAGTCGGTTATACTTTAATGTGTCATTTCGATACACCATACTCGA TTGAGGTCTCCGGCTACGAATATATCTTTATACAGTTCAATGCACTGCAT TCAACCATCGCGCATCGTGGGTACGCAATTGGTTATGAAATAAAGGATGG TATGCTTAaagcttttatattttttatttaggcCGTATTGcatagaatat ttttttaggttttggaTCCCGAGATCTCAAAAGACTTGAGTCTaatgttg aaaatcaaaattgaattttacaCCCCAGAAGTAAATTAAagcaattaaaa aattttaccaGGAATTTCCCTTCTATCAAATATTATGTCTTTGATTGTAT TACGAGCTTGTAAGTACAGCTGACCCTCTCTAATTCGTCGATACGCTCCC TCATTCGATAGAATTTAAAGCCCTAGTCATCAAGGGTCTCTCGTAAACGa tattctattattcgataagctcctttattcgatgaaaatccaattcccct tgaagatcttgaaaaattcttctttctCATATTAAAGATGTTTCAAAGAC AAATCCAGAAGTCTCAAAAGCCCGTATCATAATGGCGACCATTGTCGGTA TAGTATTCGGTATGTGTTTGAGTACCGCTGTTATAGTGATTGTATTATAC CGGAAAAGAAAACGGAAAGTGCCAGAAGATCCGGAAGAGATGTCAAAACA TACGGAAGACGAGCTTAGTGGAGATAATacgaaaaatgatgaaaattata GTTCCAATACAGGAGATGAAGACTCAAGGCAATCTGTTGATATATGTGAA GGTGGAACTTCAAGAGATTTTGGTGCACTTAACGGATTGAATTTAGAACA TTTACAAAGATTAAATAAATTGTTTAGTTCAACTGTTGCAGCGGACGGTG AGGGACAAAAGGAAAGTAAAGATGAAGCAAATGAAAAGGATAACTCATCT CaaaatgatgatgaaatacGCTGTGAAAGTCAGTTTCAGTCGAGATGGgg tttttataagatgctttgatAATTGgtgataattggtcatttgaagtaat aaaatgacacgttctttagaaaaaaggaacaagattgttttattactggt taacgaccaactaaattaaataagagcttgtaaactNgcctgccccaaag ttttagcctcgttttggcgaaaactcgtgaccacacccttaaaaatgaaa attttcaaaaaatgaaaaaaacatccgcagatattcacccaaggaacaag tgtgccatttatatgaacaaactataaggtttcgatggctaaaaaatcaa aat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069157TCONS_00069157Clytia hemisphaericatranscript
TCONS_00069158TCONS_00069158Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069157-proteinTCONS_00069157-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_495supercontigscaffold_495:172385..176837 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24 0.16 0.47 0.6 0.31 0.26 8.88 9.16 8.87 7.8 7.48 8.5 0.84 0.8 0.46 0.3 1.35 1.49 2.44 3.91 2.43 2.71 1.25 1.91 1.6 1.53 5.48 4.69 0.09 0.25