XLOC_043454 (gene) - C. hemisphaerica

Overview
NameXLOC_043454
Unique NameXLOC_043454
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_508:132661..138189+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043454 ID=XLOC_043454|Name=XLOC_043454|organism=Clytia hemisphaerica|type=gene|length=5529bp|location=Sequence derived from alignment at scaffold_508:132661..138189+ (Clytia hemisphaerica)
CACTTTTTCGCAAGAAAATAATAAGCAGTGCTACCTGCACGTCAacataa ataaaaagttaaggaaaaaacaatttcattttcgtcAAACCTTTGAAAAT GCAGGATAATTACTTCGGACACCATAATATGCAAACCAAACTACCGGACA CCATGGGACAGAATTACGGAAATTTGTATTCATTGAACAGTAAGTTaatc attttcaatttattACTCTTTACTTTTTATTACCCCATCTTTTTATTTAT TGCCTTTCAATAATTGTGGCATTAACATAATGTAAACGAATAAATAAATT CGAACATCAATAAATTTGTTTCGCTTAACAATTTTCACCGGATAAAGCAA TCGATATAAATCCTGAACCAATTGACTCCTTTATTTTTTCACGGACATCA TTTTTATCGAGGGAAATAAAAacactttgcaaaaagttttatttttccag TGATGAAATAATAACGACAGGGTCTGACTGTTGCATGGAGGACTAAAAAG ACTTCACATTGTTTGGTTTTATCAGAAAATAAGGTAGACCGCTATCACCT CTGGGGCATCAAAGCATTTTGCAAAGGAAGACTTGGCAGATGTTAGAAAC GCTATTCTGAAGAACCATGATTGTCGATTTCTCTTGTCATTGCACAGAAT GCCAGTCATACTGTAGTGTATTTTGAAAATAGGCGTCTACTGAAGTTTTC ATCGATTCaaagatttttataaattttatcggattttcaaagttttcagc ATTTTTCGAAGTTCTCGATAATAAACAAAGTCGAAACATAACATAACAAA Tcatatttttcaagattttaattttttttttcaagatttcaaagcttttt ccataaaattcGTCATTTTCAATGCTCTTTGACATGAACCGAAGTTGTTT AGCGGATATTTTgcgtgtttttttatattaaaagGATACGGAAGGACGTG GTCATTATCAACAATTTAGACGTCCAAACCGCAAAAATGTTGTCACAGGT CACTTTTGTTATGCCAAAAGCAATTTTGTTTTTGGCAACTTTTCAGTGAC ACACGCACACACATGTTTTATCAATATCGATGcagatgaaataaaaatat atttctccAGAGAAAATCagccattgttttttttttcaaaaaattcaaaa aatgaattgtTCAAAAAGCTAAAAGGATATTTAGATACCTTATcggtcct ttttacgccggcccttatttcgccacagcctaattttgggcttacgccaa taagggccgtaaataacgtcaaaatttgtaaacatcgctattcaggcttc aaaacagtaagtattaactaaaatttacattaaaatgtcatctttcagta ttaaactgttgaaaattccattaaAAATCATTGGTTGTCGTGAAGTTTTG GACATAGAGTGAAAGTTTTTGGAGTTATATAAGTTACATAGAGTTTCATC CTTTAATCATGcctaaaattctttaaattgagaaaaaatggtcaagtgaa aattacaaaattttggccctttttatgCCTGCCCTTATTACGCcgcgagc ccaaaaataacgccaataagggccggggtaaaaagggccgataaggtagt ttgaaatatttttccatagATTTCTTCCATGATTTTAGAAATTTGGAAAT GTCACTtctgtcattttattttttgaaaacgaaaggattttgagattttt gctcAGGACCATGGAATAATTTACAATCAAAATATCTCTAACTATCTGAT TATTCCTTTAAGCATTGTTGTAAAGATAATTCACTGTGACAAGGAAGAAG TGAGGTTTATTTTAACCaatgaaatttttcgaaaacgaAAATTATCAAGA ACAGCGCAAATTTTCTTATCTAATTTAAAGCGTTTAAAAGATCAGAATCG TCTAGAAAGTGGAAATTagggagaaaataaaaaatatctaaaaataaaat atttactcacttaaaaaactttttctaaaactaaaactaatttgaaattg aaatttaactTCTTGGGAAGGAATGAagattttctcgatttttttttgct ggaaaacCTTTAATCCTCGGTTAGACACGTATTGGCAATCCAAGCGGTAA GATGAAAGAAACTTTACAAACTCGAAAGATTGTTATTGTGCTAATTGGCA TGGCAGAGAATTTGGTATTTAATTGAAGTGCAGAGAAGCACCACGTAACA ATTCTTGATTGATCAATCAACTTCTCAACATGATGATGTTTTTCCACTTT CTTTATGCAACTAGACAAAACTACTTAAAGATCTTTCAACAGATAAAGCG ACAGTACCAGAATTGAAAACAGTTTCGAAAATGCAGTGCAACTTGTAGAA GATGTAAAATGTGAAAATAGAAAACCGACAACGAATGGCTGCATGTAACT AAAtgaataaacataaaaaattatttgaaatattcTGAAAATTATCATAT CATGATATTATATTGATACAATCTTCAAATCATTATCCCTAATACTGGGT GGTGTCCCGGGGAGGGGGCAGTCGATTAGTAAACGACCGTAGACCGTAAG TTACTCCAAGGTCCCGAATAAACCTCCCAATCCGGTTATCAATTTCCAAT AATTTTCGCATCCCCACGTTCTTATAATAAGGACCCCTTCCCGTatattc atttttgaaaatattttcaggacACCCTCAAATAATTTCGGACCCCCCTA TTCGGGATCTTATTATTCAAAAAGGTGATATAATTTTGAGACAGATTATA AGCTGATCTTAttctgaaaaagtttttatttaactaagtcatttttatta aaaaattccaagaaAACTGAAATTCCTTCCACGGTTAATTAGGCTAATAA GCCTACATTAGTGGTGAATAAAGAATTtcgaaattaacaaaattgaatta tttgaaAGATTCCTCCCCTCCTCTTTGTAATAAGGCAAATTTCACGTGAT GGTTAAAATACCACTAATGTAAGGGAAACATGCCAGTTTtgattaaaata tttcatagcGAAACTGtcttcaaatgaaaaactttaataaaGCTCAGTAC CAACTAAAAGATTAAAAGGTGTGATTGGCCAAAATTATATTGCAAAAATA TATTATTAGCGTAGGACTTCggcgaaaatttctttgaacTGTTAGTGATG TTTAACAAAATGCCTAAATTTAATTGCTTTTGTAAATCAAGTTACTGGTG AAGTATGCTCAATTATACTTCAATCAGTGCGTGTACACATCATGCCAATA AATCTTTATCAGGCCAATCGCACCTAATTGAACACATTTTCTATAATTTG GCACTCCAAGGCAAAAACTTTCAGCATTTTGAATCTAAAGCAGCAATCTG AAATGGCATGAATTTGGTTTAGCTTAACAGTGACCTGTATAATGAGGTAT CAATTACAGCTATTAGCATGTCTAGCCGATGTCTACAAGATTTGAGGGCG GTATAGAGTGACCGGAATTGTGAATTAGTTGCAAATCTAATAAAAAATGG GAAACGTTTTAATGCTTGTGTGGTGGTATAGACTGTTGGGTTGAGAGAAA GGAAGCGAgagttaaaaacaaaacaaccaCGATGTTGGTTGCAGGAAACT CCAACATATTAACATTTTACCATAGATTATAGCTTTTTGTAAAGTGTCAT TGATCATTGTGCTATTGTCCGTATGCTCCAGTGGAAGATAAACTTTCAGT GGGAGGTTGTAGCAAACTAACCTGCCTATCCAGGGGCTATTGTTTGGTTT TTCGGAGACGACCGATGCCTGTAGGACTAGAGGGACAATCCTCAAACCCT CCTTTTGACTGATAAATTGTAATGCAATAAAAAGATCCCTATAAAGACAC TTTATTCCTTCACAGAAACAACAAGCGCCACAGTCAAAACACCAATCCGA CCAATTACCAAACTTCCCACCACCTGCACCACAAATACGCACCCAAAGAA ATCCAGAACTGTTTTCACCAAGAAGCAAATCAATGAATTGGAAAGTGTAT TTTACCAGAAGCGATATCTGACCATTAAAGATCGTGAAGAATTATCGAGA AGATTGACGCTGACGGAAAATCAGGTATCAAAAATTTCCAATGACAGACA GTGTGCTGTGAAAGAAGTACACTTGTTTCGACAGCAGATTTTTTAATCTT TGAAATGGGTACTGTTTTTAGTAAATCCTattccaaatttcaaaatagca tAGAGGATTGTAGCCTGATTCCATTttggtaccgttggaaagctttttat actctttctaaaGGCATGCGGTTTATACCCCTTCAAACAACGTGGTCAAG AGCTATGGCAAAAATCTTTGAGCTGGTTTTCTGACCTATTTTTGACTCAG ACACacgacttttgggggactgagGGTTAAAATACACAGTTCTAACAGTT CAGTGTCCAATGATTAATACTAAGAAACTTGATTCCTTTTTCCATGTTAC AGGTGAAAGTCTGGTTCCAAAACCGACGTAACAAATGGAAACGAGAAATG AGTTTCAAAGTGGAATTTGCCAAATTCAACATGGTGCCCAACCCCTTGAA CATGGGTAGAGGTGTAGATGGTACTTTACCGAACAATCTTATGTTGCCCA CAACAACTACGTCACCGACAGAAACATCGGATTTTCAAATGACATCACAT CGTTATGAGGGATATGCATACCGTAATGCATTCCAAGACAGTTATTATAA TCCATATCCAAACGTGTTCAACAACCAGGACACACAAAACCAACATAATT ATTCACCACTTTCAAACAGCAGTAGTAATAACGAAGTCTCCTATCAAGAC AACAACACTTCTATGCCTCAAACTTCGGTTGCTTTGGAAACATACGACAC CAACTCCATTGTTTACCCACCCCCACCACCACCGCCGCCAGCACAACCAC CACAACAATCGGTAGCGCAAAACATGACGGACTACCAAAATCAGCAACAT CATGCTATTTATTCACACTACAACAACTGCGACACTCAATATGACACAAC AAAATACCAAGGAATGGATCAACAAATCCCCTCCTCGTACGACATTCACA ACTATTCACCAACCGGTCAAACAAGCTCATACACATCACACAGATACACT GATGAAGCAACGCAACCACAAACCGACCCCATCACATCTCAAATATCCCC TTTAGTAGCCAAATACACAGATGAACAACAACAAGCTTCACCTTACGAAG CGTGCAAGTACACAGAACACAACCAACAAACTACTTCATACACGCCCAGA CTCACGCCCATGGTTCCCACAACATCAGGGCGTGAAATGTACACTGATAA TACAGGTGTTGTTTACACTACATTAACTGATTACAGAAACAGTAGTGAAA ACCAAACCTTAAACTTGCCCAATCCACAATTTACATTCGGCAGTCACTAT TGAAGGAAAGATGCTTTCATACAcgtcaaaaaaaataatagttcttagtt tttatgtattttaagtatttttgtaaATTGTACATAGACATGAAtgagtt ttattttcatttttatcacgCATTAATAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069782TCONS_00069782Clytia hemisphaericatranscript
TCONS_00069783TCONS_00069783Clytia hemisphaericatranscript
TCONS_00069784TCONS_00069784Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069782-proteinTCONS_00069782-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_508supercontigscaffold_508:132661..138189 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.09 0 0.03 0 0.03 0 0.04 0.1 0 0 0.04 0.02 0.17 0 0.06 14.46 15.98 1.02 1.72 0.06 0 0.04 0.03 0.13 0.06 10.02 0.05 0.07 0