XLOC_043653 (gene) - C. hemisphaerica

Overview
NameXLOC_043653
Unique NameXLOC_043653
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_513:411595..414924-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043653 ID=XLOC_043653|Name=XLOC_043653|organism=Clytia hemisphaerica|type=gene|length=3330bp|location=Sequence derived from alignment at scaffold_513:411595..414924- (Clytia hemisphaerica)
ATTGCATTGTAAGCAATTGGATAGTCTTTTGGCCTTCATTTAGACTTCAT
CCGCAAGTTTAGAATACTTCTTTACCAATGCTATAATTATACTTAGTTTG
GTTTGGTTAGTTTGAGGTTTTGACTCTAAGAATGGGTGTTTTACAGGTTT
TTAAAGTATTATTCTTTTCTGATTATTTACAGCTAAAATAAAAGTAGAAC
TAAAAATGGAAAATGGAAAAGAATGTGGAGATTGTTCCTTCGATTTTTCA
TCTCAAGACCTTCAATCTTTGCCTGATGAGTTGCTCACAAAGGAATTGGA
AGAAAAGATAAAAGAACTATGTTTGGACTACAATGATTTTGATGAACTCC
CAGAAGAGACAAACCGATTTATCAATTTGGTAAAATTCAGTATTAGTGGT
AATAATTTATCAACTCTGCCAGACATACAGCAACTTGTGTGTTTGAAAGA
ACTCAATTTAGATGAAAACTCGTTGATCTCTTTGCCAGACACATTAGGTG
AACTTCAAGCACTGGAGAAACTATCAATGATTGGTAATAGATTGAAAACA
TTACCAGAAAGTTTGGGAAAATTGAAGTCCTTAAGAGAACTATATATTGA
TGAAAATGATTTGGCTGTGATCAATTTTAGTTTTCAGAACCTTGAACACC
TGGAGATATTTGAAGCTACGAATAATAAACTGGAAGTTCTGTCAGAAGAC
ATTGGATGTGCCAAAAAGCTGAGAATCTTGAATTTAAATCATAACCAACT
TTTGACCCTCCCTGAAAGTATTTCTGATTTGGAAGCTGTAGAGATTCTCG
ATTTGTCTAATAACTTGTTAAAAGAATTACCAGAAAGATTTGCTTCGTCT
AAACGGCTTGTCAAGTTCATGGCTGAAAATAACACTTTTAAATATTTCCC
TTTCTGGTTTTGTGATTTACCCAAAATTGAAGAAATGTATCTGTCAGATA
ACTCAGTTACTCTTGAACCTTTTGATGACGAATTTTGCTCTAATGCTCCG
AATCTGAGAATCTTAGAAGCTGGTGCTAATTATATGAGCTCTATATCAGA
AAAATTTGGATTATTATCGAAATTGGAGCAAGTACATTTCGGGAGCACTA
TACCGGAATTGGAGAGAAGCCATTTTCAAAATGGGAATTGGATGGTAAAA
CTACCAGATTCTTTTTGTGAACTGAAACATTTAAATAAAGCAAATATCAA
TGAAAATCAGCTGAATTGTTTACCAGAGCGTTTTGGTGAATTAGAATCAT
TAACTTGGTTAGATCTTGGTCAAAATATGATACGCCATCTACCGAGTACA
TTTTGTGAATTGAGAAATCTGGAGTTTTTACAACTGTCGAAAAACCAATT
GGAGGAATTGCCCGAGGAGATTGGAAATTTTCAGAAATTAATCGAACTGA
GGCTTGATAATAATGTGTTGAAAGCTGTTCCTGATTCATTAGGTACCATC
AAAGGTTTACAGGCTTTGGATTTGTTTAGCAATGAACTTGAAGCATTACC
AGAGGTGATTTTCCAACTGAAGAAATTGACCAGATTGGATTTGGATCGCA
ACAATTTCAACATGTCTTTAGCTGATGTTCCAAAAATCACACCAGGTAAT
CTATCGACGGTTCTCTTTTGGTTCAGGCTTCTTAGGGAAATAATTTTCGC
GGAACTAATTCTGTCGGGAACTTACCCTTTGCGTAGAAAGATGAAATAGT
TTGGGCAAGAAGTTGGCGTTCACCGCGAAGTTCTAAAAAAAATAAAATAT
GAACCAATACAATATGAGCTTGGTTATTGGACTTTTGTCCCCACCGATCT
CTTTCCACGGAGCTTTCTTTTTACTTGTAATAAAGTTCTGTTTTGAAAGA
TGAAAAAATGCCACTTTCTCTGTTATTGCTTATAGCTATGCTATAATTCT
GGATGTTTTAGGTATTAACTATCCAGAACGTGATCCGAAACTAAAGAACA
ACTGGCGTGGACGTACCAGACAAGTACAGATGGACAACACTGAAGTCATC
GAGTATAAAGATGAAGGGGAAGAAGACACTATTGTAGAAGAAGAATGGAA
TTACCAAGCATTGCGCACCGCCATGCATCGTGGGATGTCGTTCTGGAGAT
CACATACTAATCGTAAGGAGACAATATATTTTTTCTTGATTCGTCTTTCT
TATAACTGGAGCATTACTGATTCAGTGTATAGACCCTTTGTCGAGTGTTT
TGTAGAAGTACTCCTTGAGTGTTTATTTGATAGCATATTCTCTCCGGCCC
TGTTTACTCAGCACCATATCAGGTACAATATGGTGATAGGGTGGGTTATG
GTATTCATGATATGCACCACTGCAATGTCTTCTGACATTACGTCACGGAA
CCAATTGCTCATTGGTTGGAAGTGACGTAAAAGCAGTCAATACGTCATTT
TCAACCAATCAGCTATTGGGTGGAACGGAAGACATTGCAATGGTGCATAT
CATGAATTATAAGTGTCTGCTATGACACTATGATTACCTACGTACATTAT
TTTCCAGCTAACGAAAGAAGAAGACCTACCGGATCAAAAGCAAACAGCGT
CACCATAACCGAAGAAAGCGAGCCTCGTTTCGATGACGACAGTGAAAACT
TGATAATCACCCCTAGCAACGAACAAATAATAATTACTAAACAAAATGGT
AGCTTTTCGACCGCGTTTGACCCCAACGAAGAAGACTGGGACGAGGAAAT
TAAAATTAACACTGAATATAAATCGATCTTATTGACTTGTGATGAACGTC
AAATATCTAACAAGGAGACTCCACTGACTGATTTTCAAAAATTTGTGAAC
CAGTATCCACCAGCTAAACAATGCTTCAGTTCAACAGGTTTTTACGAATC
GTTTGTTCATGTGAAGAAGAATCGAGAGAACGTTAAAACGTCGTTTAATT
CGGGTGATACGAATGTGTTTATTGTCGAAGGGCAATTTGATGATGCTGAC
TAGCTCTTAATCATAAGAGTTAATAAAATTTGCGATTTTTTGAGTTTTAA
TCTTTCTTAAGTGGCAATTTTTCGTTCTTTAGGATTAAATCAGTCTATAG
TTTCCCCTTTACTCTCCAAAGGGCTTATGATGCGTACTCCTCGGCGGGTG
CGACGCCGGGTGACGGTTAGTTTTTTTACTATTTCGCCTGTGCAACGCGC
TCTGTAAGAATGAAGAAGCCTCTTCTTGTAATAAAAACATGGTCTGAGTT
CTAAATCAAAATACATAATGCCTTTGTCTTCTAGTGGTTTATTTCACTGC
AATATTTTGGCTTTTGTTTTGAATTTGCCCAATACTTATATTTTTAACTG
TTTTAAGTTAATGTCCTACGTATAAATCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070118TCONS_00070118Clytia hemisphaericatranscript
TCONS_00070117TCONS_00070117Clytia hemisphaericatranscript
TCONS_00070116TCONS_00070116Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070117-proteinTCONS_00070117-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_513supercontigscaffold_513:411595..414924 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.35	4.09	3.41	2.38	14.33	10.66	12.23	11.57	6.07	7.68	8.64	5.26	5.79	5.7	5.13	4.84	5.82	5.4	2.02	2.82	4.95	4.65	4.95	5.12	11.65	14.36	1.74	1.54	3.58	3.75