XLOC_043769 (gene) - C. hemisphaerica

Overview
NameXLOC_043769
Unique NameXLOC_043769
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_52:16307..23454+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043769 ID=XLOC_043769|Name=XLOC_043769|organism=Clytia hemisphaerica|type=gene|length=7148bp|location=Sequence derived from alignment at scaffold_52:16307..23454+ (Clytia hemisphaerica)
GATCAGATTGTGACAAGAGATCGCAAGTTGACAAGTAAAGACATCCTCAA GACAATTGTTCACCGGTAAAAGCATGAGACTTTATGAGTTATTCCCACTG ACCTTCATAAACCCTTggccaagctatatccgccatctttaatcAGAGCT ATCTTTATGAAAAAGGGTTTCTGCAATGAATCCATTGCAGTGTTGAAGCC TTGCCTAATGTTGAACTTAACCCGAAAATCAATACTATGTGtgttgaatt tttcaaatttgcaacatttttgcaacttttcCAACGATTCGAACGTTCTA CAGCCAAACTCACTAAGTTAACTTTATATTTacgaatttgttttttttaa tatggtAAGTGCAACCAACCATAGGAAATCGGGAAATAGGCAGGAAAGTC AGTAATCGGCAGATCGGGATCCCCCCGACAacaagaaagtaaacaaaaca tttttgtcaacaaaaccaaaaaagAACTGAAAACCTTTTGTTTAAGGTGA CACTACTGATTGGCTGGGTTTGTCTTGCTACTTTGACTACATTGAATTGA TTCAATTTGCTTTAAAATTATCAACAACattaaaaagtgcaattaattTC AATAGGCAATTAAGATTAAAcattattctcaacttcagttgagttagaat ctgagaatgtgtgtctgtctgtgtgtctgtctgtgtgtgtgtatgtccca aaactttggggcagcctggagacttcaaAAATTGTTCGATGTGGCTGAAA TTTGGCACACTTGTTCCTTGGGTGAATATCTGGAGTTTTTCTTTTTCATT TTTCAAAATTTCTGATTTTTGGGGCCTGGGGACGAGTTTTCGCCAAAACG Aggctaaaactttggggcagcctggagacttcaaaaatggtcggatttgg ctgaaattttgcacacttgttccttgggtgaatatctgggggtgtttttt cccattttttaaaagttttgatttttggggactggggacgagtttttcgc caaaacgaggctaaaactttggggcaggctggagacttcaaaaatagtcG GATTTGcttaaattttgcacacttgttccttgggtgaatatctgggggtg ctttttaaatttttcaaaaattttgatttttggggcctgggaaggagttt ttttgccaaaacgaggctaaagctttggagcagtctacaggcctccaaaa tgatcggatttggttgaaattcggcacacttgttcatcgggtgaatatct gggggtctacacctgggcctatgaatgatttgaagccactgaagttgagc ccagtgcgttgcgcacgttcgactattagaATAGAGAATTGACATTAAAG CAATAAAAGGAACTTGTTCCAAACGTCTCTTCCAAAATCATTACACATTT CTTATCTCTAGACATGAACCACCTGTTGTGCACGAACCTTTCGAATTTCT ACAGAACGACCAAGATATGATTGTCATCAACAAACCAGCCTCCATACCGG TCCATCCCTGTGGCCGGTACCGTCATAATACCGTGGTCTTCATTCTCGGA AAAGACCACGGGCTAGAGCGGCTGCATAGTATGTATGTTTATCTGTGGGC CATAGGTAGTTAGGACTGGTTGCGCTCTAGTAACGACTTCCGGTTGGTTA GACgcaaagatcgaattagagaagattttaaattgaagattttcaacatt tttcaaaactttagaCCAATAGTTAGTCgacattagcgcgcagtggccCT GATTACCCATCATGCTTTGTGACTATGAAGTGACCTATTCGACTGACCGT GTTGTGGTAAACAGTATGGAAATACTTAATTGTTGAATCCATCTTTTATG CGAATCTTAATCTGTGTTGAGTCACGTCTCTACAATACGCATGTTGAAAG GTATAGAGTTTTTTTAACGTAATTCCCGCCATTAtagaagcaaacgttcg aatctgtagaggggatcccttacgcaaatcgaacgtttgcttccataatg gcggaagttaCGTAATTTAACAAAACATGAGAAACCTCTATTTTTGTCTT GATTATTCTTCGATCATCCGATCGTTTTTACTCTTTCCTTTTGTTTTAGC GATCCATCGAATCGACCGTTTGACATCTGGTATACTTATGTTCGCCAAGT CAGTATTATTTCGACTTAAGCTAAATTATTTAAATACCATACgctggtct aatctcgacatccgtcATCTAATTAGGACACCCTTCTTTACAGTTGGGAA TAAAAGGACGGTCGGAATAATACATCAGTCGGAGTTGCTGATAGAGAAAC TATAATTTTGCTTAGAAAAAATctttgtctatcagtgattccgacctttc tattattcctatctttaaagaagggtgtcgaaattagatgaaggatgtcg aaattagacaaACTCACGGTAGTATCTTTGAaactatatttttgtttttg cttagcgatcagggaggaaaaaatcttttgtctatcagtgattctgacct tcctattattcctatctttaaagaagggtgtcgaaattagatgaaggatg tcgaaattagacaaACTCACGGTAGTATCTTTGAaactatatttttgttt ttgcttagcgatcagataggaaaaaatcttttgtgtatcagtgatttcga ccttctcattattcctatctttaaagaagaaTATCGGAACTAgaagaggg gtgtcgacattagaccaacttacagtagtATTTTTGAATCCTTCACAACA GATGAATATCTGGTCAGAAGCAGAATAAGATACCCAACCTCGTCCACGTG TAACCTAGGCTTTATTTACGATAaatgatggacgccagagattATCATTT GGGTGTcaattgtctgtacacaaacccgatatctacggcttatttcaaaa ttcattgccgtatagggtctgttgtcattgtcttcaaaccgaccgctgcg atggagtgttggtaaGAGAGGGGAGACGAAGAGAGAaatgttgctattta taaatcatacttcatcgcagaggtctccgtgggggaatttttttatcaaa cagacaatgcgcacagagtgtactacgaagcgataaacgtgagatacact ctggcaCAGAGTAGGTATAAgtaagtatcaagtatcaaaagCCGATAATA CACGGGGTACGAGGTTTTTGGCCACCGTATCAGGTAAAATGGTCTGTTTC TCAAATTTTTACCCCCTTTTCTTCGATAAGATAAGATTTCTTTCACCGAA AGAAAAACACATTTAGTATCTATCTTGAaacaacccagctggcacacaac gttttttcgacgtttatctaacgttcacaacgtccatataacgttagatg aacgttgaaacaacgttgtgggcCAGCTGGGAAAGGGCAAAATGTTCCCT TTCAGAACACCAGAGAAAGCTAAAGCAATGGAGACAGCAGTTCACGGACG GAATGTGGAGAAAGTATACTACGCTCGCGTCGAAGGTGATTTCCCTAGGT AAGTGGAAAGTTGTTTGTTTTTGTCAATACTGTTTGGCAACATATATACT CTTTTCTCgagttcttttcttttttgtcgatAAAAGTTTGACCCATCATG TAATAGATTTTTTCTTGACTTACCCTTAGTTTCTGAgaatctttttatag aatttttcTCGAGTCTGAGAACTTTTGTGTCACGTGAACAGCAGCTCTCA CTTGAAAAATAATGATCATAAGAAACTATGAAAAATGATCAAACATATTT CTTTAGTCCGCCCATTATTAACGACTTTTAAAGAAAACCTCATTTTTTCA TTACTAAGCAATGAATATAAAGTGCTCATTAAAAAACATTATCCAAATGA AACCGGACAGGCTGTAAATTTCgcatctacaatcagtgccaaaatacttg gcacaaaagggaaattccccacgaaATTCTATAaacacaaacaatttgga agcgctctaaattaggttggaagggtagagttttaactctgagttttaac gctagacttaagatcttaggatctgaggatccaaaagttcaaaaatggtc cggtagggcttgaaatatagcctagaaaccaataaatccctcacagatcg aaatattcgatgaagccaagttgaaggcccgaaattaacattctcgctcg aacttcaattttcgaaaaatggtagaatagccaaaattgccaatatgtta tggcactgattgttgGTCTGTTTGTGTCTGTGCTTGACCATCTAAACCTA ATATGTGGTTAGACTGGagattcaaaaataattaactGGAATTTGgcgca aagcttctgattgtctgtttttttttcatttttcttattttcacattttc agGTCTGCGGACTTAATGATATTCTCTACAGTCAACACGGCATATTCTCT TGTTACAAATTTTTCCAAACcattaagggaacttattttggtgagaacta attttggcaaatttgatgagtttagacaaaattcgccaaaatgaattttt gttgtttttttgtctcAATATCcttaaattcatcaaaattgcaaaaaagg ACAGGTTTAGGTTattgtcattcgccaaaattagatctcgccaaatttac caaattttGGACCATTCGTCAAAATAAGTTCTTgtcaatattaaaaattt tcaaaatttagtaattcgccaaaattagttttcgCCGAAATAAGTTCGCT AAATGTAATGAGCTGTTATTGAATAATTGCCAACTCCAGTGCAGGATTTC TCGTTGTCAATCAATTTCGTTCACTTTGGTTTATATTTCTAGTGAAAGTA TTGTCGTTGAAGAACCGTTATTAACCATGTCTCATAAAATCGGTGTTTGT CAAGTTCATGTAGACGGGAAACCATGCTCTACCACTTTTCACAAGATATC GTTCAATGGTAAAAGCAGCTTGGTTCGTTGTAAGTTAATTCTCATGCTTC ATTCTTTTtattagtgttttttttttcttttgcactgaggtttttaaatg aaacaatagagtttCGAAatctaagccaatcagctgtgctttaaacattc ttttgttttagatctctattgataaacttctttggttaaaaatttctatt atgTTTAATCCTACTAATAGGTGAATTCCCGTTGGGGGTCatatatacag tggagtctccataactcgaaaaccACACGTGTAAAACAaagttgttcgag ttaaggataTTTCGAATTATGATTAACATTtaaaaggcattgttaactga agggacgaggaAGCTTGTTCAAGTTAATAAGGAGATATTCAATTTAAAGA GgttgagttaaagagactctattGTATTATTTCCAAAAGGATCTTTAGTC CTTGTACACGAGCGTCACGGGTGATTTTTCNTTAAGGAGgttgagttaaa gagactctattGTATTATTTCCAAAAGGATCTTTAGTCCTTGTACACGAG CGTCACGGgtgatttttcacttttagaAAACTTGATAGGTTAGCCTCCGT ACTTTTTCTTTCCGAAGAAGAagagttttgtttcatttttccataAATGt acccgtttcatatcagacacatatttcatatcaggacagtgNTTCACATA AGTGtacccgtttcatatcagacacatattttatatcaggacagtatcta cctattgttatatcatgctgatataagcaaaaaatggttattatttcctc tttctgaccaatcttgctccacatccgtttCAAACCaaagtgaaaaagct tgtaaattaaaattgacgagtaagcaaacgatatcactcttatttaaaaa caaaacctttaacatgtAAGATTAAATAATGTTTATTTCCAATCCTTTAT TCGGTGTAGGTTTACCACGTACAGGACGTATGCATCAGATACGAGTCCAT TTGCAATGGCTTGGTCACCCCATTCTAAACGATCCGATTTACAATCATGC CACAGCTTGGGGTGAAGGTGGTGGAAAGAAAGGGACAGAGATTGATGTCA AAAAGGTTTGAAATACGTGTTGGGTATAGCCTGGATATATTCTTTTTAAT CAAGCCTGGAATCAGAAGCCTGATATAAGGCTGACggcaatagcgagttt atgtattcgagataaatcgagggggacggtataaagcaaagctgacatgg ggtcaaaatcgccgtccactttgctcgacgacggtaaaaacaccaagata ccgtcgtctgtttaggtgagcaaaggcgatattgagccgtacatcaacta tcgactttgttttgtatcgatttcacttaccgtcgccctcgatatcctcc gatacataaactcggtaatatagCGTGTTTAGGTGGTGTGTTTAGCCTCT ACGCTATATGTCTTTTTAATCAAGCCTTGAATCATAAGGCTTAGCTAAAG CTGATGGCACTAAAGCGTCATCGGCGCTTagcttttttaagcttttttaa ttCTAGTAAGTGAAACTAGCTTGGATTCCTAGGATATTCTAGAGATTATT ATGATCAAATCTAGAATCACAGGCTCATAGGTACGGAAAAGTTTATACCG ATAGAAATTGGGCTTAAAATTGGGAAACCGGTCTCTCGGAAGACGCTCTT TTTCAGACCTGTACAAATAAAACGATGCTAGTATTTTGTTTGATGAGAAA TAATAGAATTGCTGAACAAATTCCAGGTGGTGGCTGAACTCATCCGAACA CGTAAGGACAAGTCGTACGACGACGCCACTGGTGGTCAGGACGAAAATAG AGCTACGGCAAAATCCGAGAAAGACAATAATAATCATCGTCAGTCGAAAA AGCTGAAAACAGACGACGGGGGTTCTGTCGAAGTAAAAACGGAGATAACG TCTAATTCTTCGAATTCAATAGACGCTGATGCTAATCAGAAAAGTAAAGT TCAAAATGGCTGTTCACTAAAAGGGGTGAGAGAAACAGACAATATAAAAA CGAACGGTACTTCAGACAAGTTAAGTCATTTAAATATTCAGAAGGCAAAC TCAACTGAGTGTGAAACAAACTCTACGACAGAGAGCGAAACTTCTGCAAT GGAGAACAAAGTTAAAGACCTTTCTACTCTAAAATGTGAAGAAAATTCTA ATAAGGAGAGTGTGGCGGAGAAGAGAGAAGGAAGCTCTGGGAAGGAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070285TCONS_00070285Clytia hemisphaericatranscript
TCONS_00070286TCONS_00070286Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070285-proteinTCONS_00070285-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_52supercontigscaffold_52:16307..23454 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.59 11.75 2.79 3.96 9.93 8.75 13.11 16.57 8.11 8.29 11.04 8.27 12.21 12.64 14.8 17.54 12.51 16.32 9.18 5.96 6.52 6.82 15.84 13.28 15.23 15.32 5.13 4.33 10.95 12.6