TCONS_00001100-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001100-protein
Unique NameTCONS_00001100-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length695

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001100-protein ID=TCONS_00001100-protein|Name=TCONS_00001100-protein|organism=Clytia hemisphaerica|type=polypeptide|length=695bp
MHNKKRYNSTKPNECRMTINTSSVDSEEIEMTNGDQVEDEEAEEENILFA
KQKELLHSDVNDKLVVGQSWYMLDKHWYKQLKKYIEIGADNVDPESENPG
PIDNTPLFETASQNVREHLLEGSEFKLINKRGWKRLLTQFGLAEGQEPLQ
RTVIEHGIFRKEAKVEIYPLRLQICLFKNLENEIVKMISKTTTLDIVVKI
MKEGLGIPEDEEVRLWSKFMQNTYELLLINQAKPTTLQDHGINSGQTLVL
EQKNEENKWPRQTRTRSVSGSSSSAMNVTNSPSESSFSSASNYSSYSSYQ
RQHSTTYKPGLCGLSNLGNTCFMNSALQCLSNTTPLMKYFLANTHKSELN
PTNPLGMNGKVAEGYADLMHQMWSGNQSHVSPRQFKMTVGRFAPRFSGYQ
QQDSQELLAFLLDGLHEDLNRVKQKPYIEIPDDKGRADEVLAQEAWTNHS
KRNDSVITDNFHGLFKSTVECPECGKRSITFDPFCYLSLPLPIKRERTLK
ITFVPIDHSKRPIQMKVTIPKLGQTIALCEAVSKLTGVEPDKMIITDVFN
SKFHKRFTRNESLSQITDKDDIFVYEIPVRIKEIDESNLAVVPIYMKTVV
ARSTYSSYPSTSLFWRPMLVVVPKKAANADDVYHIIIKAMRRFVKVPKVE
VKEEVNEVESDEKEVNQHQEVDGDGPTPPLEKDQDEAGTFSTFLI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000618XLOC_000618Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001100TCONS_00001100Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006615Pept_C19_DUSP
IPR028135Ub_USP-typ
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0004843 thiol-dependent ubiquitin-specific protease activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 648..671
NoneNo IPR availableGENE3D3.90.70.10coord: 298..664
e-value: 4.1E-66
score: 222.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 655..695
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..290
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 304..499
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainSMARTSM00695duspcoord: 63..157
e-value: 8.5E-23
score: 91.7
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainGENE3D3.30.2230.10coord: 34..168
e-value: 2.3E-21
score: 75.3
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainPFAMPF06337DUSPcoord: 67..154
e-value: 1.3E-13
score: 51.2
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainPROSITEPS51283DUSPcoord: 47..154
score: 13.594
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainSUPERFAMILY143791DUSP-likecoord: 58..155
IPR028135Ubiquitin-like domain, USP-typePFAMPF14836Ubiquitin_3coord: 173..261
e-value: 2.3E-15
score: 56.1
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 312..586
e-value: 1.4E-46
score: 159.0
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 313..328
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 312..640
score: 30.29

Blast
[Close]
BLAST of TCONS_00001100-protein vs. Swiss-Prot (Human)
Match: UBP15 (Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15 PE=1 SV=3)

HSP 1 Score: 584.719 bits (1506), Expect = 0.000e+0
Identity = 289/637 (45.37%), Postives = 425/637 (66.72%), Query Frame = 0 
Query:   67 GQSWYMLDKHWYKQLKKYIEIGADNVDP-----ESENPGPIDNTPLFETA-SQNVREHLLEGSEFKLINKRGWKRLLTQFGLAEGQEPLQRTVIEHGIFRKEAKVEIYPLRLQICLFKNLENEIVKMISKTTTLDIVVKIMKEGLGIPEDEEVRLWSKFMQNTYELLLINQAKP-TTLQDHGINSGQTLVLEQKNEENKWPRQTRTRSVSGSSSSAM---------NVTNSPSESSFSSASNYS--SYSSYQRQHST-----TYKPGLCGLSNLGNTCFMNSALQCLSNTTPLMKYFLANTHKSELNPTNPLGMNGKVAEGYADLMHQMWSGNQSHVSPRQFKMTVGRFAPRFSGYQQQDSQELLAFLLDGLHEDLNRVKQKPYIEIPDDKGRADEVLAQEAWTNHSKRNDSVITDNFHGLFKSTVECPECGKRSITFDPFCYLSLPLPIKRERTLKITFVPIDHSKRPIQMKVTIPKLGQTIALCEAVSKLTGVEPDKMIITDVFNSKFHKRFTRNESLSQITDKDDIFVYEIPVRIKEIDESNLAVVPIYMKTVVARSTYSSYPSTSLFWRPMLVVVPKKAANADDVYHIIIKAMRRFVKVPKVEVKEEVNEVESDEKEVNQH----QEVDGDGP 676
            G +WY++D  W+KQ KKY+  G D+ D      ++  PGPIDN+ L +   +Q+++EHL++  ++ L+   GW +L++ + L EGQEP+ R V+E G+F K  KVE+Y   L++C   N+ N + +  SK  T+D + K +++   IP+++E RLW+K+M NT+E L     KP +T+QD G+  GQ LV+EQKNE+  WPR   T    G+S+ +          +   +   +     SNY   SY++Y+    +       +PGLCGLSNLGNTCFMNSA+QCLSNT PL +YFL + ++ ELN  NPLGM G++A+ YA+L+ QMWSG  S+V+PR FK  VGRFAP+FSGYQQQD QELLAFLLDGLHEDLNR+++KPYI++ D  GR D+V+A+EAW NH KRNDS+I D FHGLFKST+ CPEC K S+TFDPFCYL+LPLP+K+ERTL++  V +D   +P+Q KV +PK+G  + LC A+S L+G+  DKMI+TD++N +FH+ F  +E+LS I ++DDI+V+EI   I   +++   ++P+ ++     S+Y+ +  +SLF +P L+ VP+     D +Y++++  M R+VK+            E++E E + H    Q ++G+GP
Sbjct:   27 GDTWYLVDSRWFKQWKKYV--GFDSWDKYQMGDQNVYPGPIDNSGLLKDGDAQSLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNKYMSNTFEPL----NKPDSTIQDAGLYQGQVLVIEQKNEDGTWPRGPSTPKSPGASNFSTLPKISPSSLSNNYNNMNNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGIPADKMIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEI--NINRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTE-DKLYNLLLLRMCRYVKI----------STETEETEGSLHCCKDQNINGNGP 644
The following BLAST results are available for this feature:
BLAST of TCONS_00001100-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP150.000e+045.37Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo s... [more]
back to top