TCONS_00002944-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002944-protein
Unique Name	TCONS_00002944-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	520

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002944-protein ID=TCONS_00002944-protein|Name=TCONS_00002944-protein|organism=Clytia hemisphaerica|type=polypeptide|length=520bp
MWLQIAFAAIIVSFTAFYLYMKHKMSYWKRRGIPEDKGYFPFGSKHAWDL
LQRKLPFMHMTNYAYETHPGEKVVGTYDMFGSPALVIRDPDIAKLILVKD
FDNFMDRKPFHFNMYGPKSKNNRYMPYMLLELRGQKWKNVRSSLTPIFTS
GKLKNMIPLIHKVADNCETYLDKNIGVEFEAKELLKGYALDVIISTGFGY
ENDTINNPENIFKKHADVIKGKTFSLKLIIAILMFMACPRLLRWLDLSIF
NKNSEDFFAALIVKTIKERKECGQRRNDLIDVCVDILEKERKENEKSVED
EKEAKRRNYEMEKIIIANSLIMFLAGFDTVSSTSSLMMYFLAKHQDCQER
LYQEVQEAIESTGSTNFDYATIMNMPYMEKFFQETLRKYPFVHLERCSKE
EYKIPDTDIVIPKGIFVRYAATAVVKDEKYFPNPEVFDPENYSAEKKVDR
HPFVSGGFGHGPRNCIAQRFATMEVKIVIARLLSKYKIAPCSKTVDELIP
DPRSRSGQPKGDIWVTVEKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001616	XLOC_001616	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002944	TCONS_00002944	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450
IPR002401	Cyt_P450_E_grp-I
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 284..307
None	No IPR available	GENE3D	1.10.630.10		coord: 18..520 e-value: 4.1E-90 score: 302.1
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 465..476 score: 36.34 coord: 380..391 score: 33.43 coord: 325..342 score: 35.63 coord: 456..465 score: 50.5
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 74..502 e-value: 3.5E-78 score: 263.3
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 24..520
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 455..465 score: 41.44 coord: 465..488 score: 23.92 coord: 420..444 score: 29.64 coord: 314..331 score: 31.7 coord: 334..360 score: 19.79
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 458..467

Blast

[Close]

BLAST of TCONS_00002944-protein vs. Swiss-Prot (Human)
Match: CP3A4 (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 224.942 bits (572), Expect = 2.891e-67
Identity = 147/456 (32.24%), Postives = 237/456 (51.97%), Query Frame = 0

Query:   72 KVVGTYDMFGSPALVIRDPDIAKLILVKD-FDNFMDRKPFHFNMYGPKSKNNRYMPYMLLELRGQKWKNVRSSLTPIFTSGKLKNMIPLIHKVADNCETYL--DKNIGVEFEAKELLKGYALDVIISTGFGYENDTINNPENIFKKHADVIKGKTFSLKLIIAILMFMACPRLLRWLDLSIFNKNSEDFFAALIVKTIKERKECGQR-RNDLIDVCVDILEKERKENEKSVEDEKEAKRRNYEMEKIIIANSLIMFLAGFDTVSSTSSLMMYFLAKHQDCQERLYQEVQEAIESTGSTNFDYATIMNMPYMEKFFQETLRKYPF-VHLERCSKEEYKIPDTDIVIPKGIFVRYAATAVVKDEKYFPNPEVFDPENYSAEKKVDRHPFVSGGFGHGPRNCIAQRFATMEVKIVIARLLSKYKIAPCSKTVDELIPDPRSRSG--QPKGDIWVTVEKR 520
            KV G YD    P L I DPD+ K +LVK+ +  F +R+PF     GP      +M   +     ++WK +RS L+P FTSGKLK M+P+I +  D     L  +   G     K++   Y++DVI ST FG   D++NNP++ F ++   +    F     ++I +F     +L  L++ +F +   +F    + +  + R E  Q+ R D + + +D    +  E+ K++ D +            ++A S+I   AG++T SS  S +MY LA H D Q++L +E+   + +     +D  T++ M Y++    ETLR +P  + LER  K++ +I    + IPKG+ V   + A+ +D KY+  PE F PE +S + K +  P++   FG GPRNCI  RFA M +K+ + R+L  +   PC +T    IP   S  G  QP+  + + VE R
Sbjct:   70 KVWGFYDG-QQPVLAITDPDMIKTVLVKECYSVFTNRRPF-----GPVG----FMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLE------------LVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYD--TVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI--NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ---IPLKLSLGGLLQPEKPVVLKVESR 496

The following BLAST results are available for this feature:

BLAST of TCONS_00002944-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002944-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP3A4	2.891e-67	32.24	Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1...	[more]

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TCONS_00002944-protein (polypeptide) - C. hemisphaerica