TCONS_00003104-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003104-protein
Unique NameTCONS_00003104-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length249

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003104-protein ID=TCONS_00003104-protein|Name=TCONS_00003104-protein|organism=Clytia hemisphaerica|type=polypeptide|length=249bp
ICFVGYHLVSSSTYDSCAKNDTKLRNTYLTGGYASSVFFNTSTVTSASSI
PGLTGNVFQDNIGSFYKKSGEVEEGVSGIQGEIISDMTTSFTVLLAIFFP
SVTGIMAGSNRSGNLKNAQYSIPRGTIAAILTTSSIYLLAVLFFGATVNG
DLLRDKFGDSIGGSLLASSVAWPNKWIILIGSLLSTIGAGLQSLTGAPRL
LQAIANDGVVPFLQFFSVVSKDGEPKRALFLTLLISEIGVLIASLDAVA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001724XLOC_001724Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003104TCONS_00003104Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004841AA-permease/SLC12A_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004841Amino acid permease/ SLC12A domainPFAMPF00324AA_permeasecoord: 64..246
e-value: 3.2E-27
score: 95.2

Blast
[Close]
BLAST of TCONS_00003104-protein vs. Swiss-Prot (Human)
Match: S12A5 (Solute carrier family 12 member 5 OS=Homo sapiens GN=SLC12A5 PE=1 SV=3)

HSP 1 Score: 242.276 bits (617), Expect = 1.758e-73
Identity = 133/275 (48.36%), Postives = 176/275 (64.00%), Query Frame = 0 
Query:    1 ICFVGYHLVSSSTYDSCAK-----NDTKLRNTYLTGGYASSVFFNTS--------TVTSASSIPGLTGNVFQDNIGSFYKKSGEVEE--GVSGI-----------QGEIISDMTTSFTVLLAIFFPSVTGIMAGSNRSGNLKNAQYSIPRGTIAAILTTSSIYLLAVLFFGATVNGDLLRDKFGDSIGGSLLASSVAWPNKWIILIGSLLSTIGAGLQSLTGAPRLLQAIANDGVVPFLQFFSVVSKDGEPKRALFLTLLISEIGVLIASLDAVA 249
            IC +G   +S   +D CAK     N+T    T L G + SS F N +         VT    IPG    + ++N+ S Y   G + E  G++ +              + SDMT+ FT+L+ I+FPSVTGIMAGSNRSG+L++AQ SIP GTI AI TTS++Y+ +V+ FGA + G +LRDKFG+++ G+L+  ++AWP+ W+I+IGS  ST GAGLQSLTGAPRLLQAI+ DG+VPFLQ F     +GEP  AL LT  I EIG+LIASLD VA
Sbjct:  309 ICLLGNRTLSRHGFDVCAKLAWEGNETV--TTRLWGLFCSSRFLNATCDEYFTRNNVTEIQGIPGAASGLIKENLWSSYLTKGVIVERSGMTSVGLADGTPIDMDHPYVFSDMTSYFTLLVGIYFPSVTGIMAGSNRSGDLRDAQKSIPTGTILAIATTSAVYISSVVLFGACIEGVVLRDKFGEAVNGNLVVGTLAWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAISRDGIVPFLQVFGHGKANGEPTWALLLTACICEIGILIASLDEVA 581
The following BLAST results are available for this feature:
BLAST of TCONS_00003104-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S12A51.758e-7348.36Solute carrier family 12 member 5 OS=Homo sapiens ... [more]
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