TCONS_00003285-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003285-protein
Unique NameTCONS_00003285-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length771

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003285-protein ID=TCONS_00003285-protein|Name=TCONS_00003285-protein|organism=Clytia hemisphaerica|type=polypeptide|length=771bp
MSLTGASSSARSSKSTNLEQIWDDLKEGIQQIYLKQNMPKKRYMQLYTHV
YNYCTSVQNQTQNQRISKRKSANQGGAQFVGAELYKRLKDFLKTYLTNLL
RQGIDLMDESVLTFYTQQWEGYKFSSKVLHGICAYLNRHWVRRECDEGHK
NTYEIYNLALVTWKDVLFKALDIKVTNAVLELIKRERNGETVNTSLISGV
IDSYVHLGINEEESRSNGPTLSVYRLHFEANFLTDTEQYYTAESNAFLAE
NPVTEYMKRAEARLKEEQRRVQVYLHESTQIELAKKCEQVLIEKHLDTFY
TEFKNLLTDDKNEDLGRMYSLTARVPDALGTLKQLLEEHIYSQGLDTIEK
CGESALNDPRLYVTTMLGVHGKYHGLVSSSFNNDSGFVAALDKACGRFVN
ANAVTKQASSSSKSPELLARYCDSLLKKSVKNPEEAELEDILNSVMVIFK
YVEDKDVFQKFYSKMLAKRLVQQNSASDDAEATVITKLRSMCGYEYTNKL
QRMFLDVNVSKDLNEKFKSHIQRSETDSLNLDFSVQVLASNAWPFQQSAT
FALPTELEKCLQRFTTFYSAQHSGRKLHWLYTLSKGELVTNCFKNKYTLQ
ASTYQMSVLLMYNDQDSYTVEQIHEHTQIKMDLLPQVLAILLKIRILISD
KPMGDGQIDLNANIRLYKDYKNKKLRVNINVPMKTEQKQEQEQTHKFIEE
DRKLLIQACIVRIMKMRKVMKHQHLLTEVLTQLSSRFKPGIPVIKKCIDI
LIEKEYLERVEKEKDTYSYLA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001824XLOC_001824Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003285TCONS_00003285Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019559Cullin_neddylation_domain
IPR016158Cullin_homology
IPR001373Cullin_N
IPR011991WHTH_DNA-bd_dom
IPR016157Cullin_CS
IPR016159Cullin_repeat-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0031625ubiquitin protein ligase binding
Vocabulary: Cellular Component
TermDefinition
GO:0031461cullin-RING ubiquitin ligase complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0031461 cullin-RING ubiquitin ligase complex
molecular_function GO:0031625 ubiquitin protein ligase binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 257..277
NoneNo IPR availableGENE3D1.20.1310.10coord: 4..166
e-value: 1.6E-46
score: 157.6
NoneNo IPR availableGENE3D1.20.1310.10coord: 412..527
e-value: 1.5E-43
score: 147.1
NoneNo IPR availableGENE3D1.20.1310.10coord: 167..297
e-value: 8.3E-44
score: 148.1
NoneNo IPR availableGENE3D1.20.1310.10coord: 298..405
e-value: 4.0E-29
score: 100.4
NoneNo IPR availableGENE3D4.10.1030.10coord: 528..601
e-value: 4.3E-22
score: 77.0
IPR019559Cullin protein, neddylation domainSMARTSM00884Cullin_Nedd8_2coord: 698..765
e-value: 2.8E-34
score: 129.9
IPR019559Cullin protein, neddylation domainPFAMPF10557Cullin_Nedd8coord: 701..762
e-value: 5.4E-27
score: 93.5
IPR016158Cullin homologySMARTSM00182cul_2coord: 443..592
e-value: 1.8E-75
score: 266.7
IPR016158Cullin homologyPROSITEPS50069CULLIN_2coord: 413..642
score: 61.973
IPR016158Cullin homologySUPERFAMILY75632Cullin homology domaincoord: 409..681
IPR001373Cullin, N-terminalPFAMPF00888Cullincoord: 22..653
e-value: 3.3E-191
score: 637.0
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 667..771
e-value: 3.3E-37
score: 126.4
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 602..660
e-value: 2.3E-13
score: 49.5
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 682..771
IPR016157Cullin, conserved sitePROSITEPS01256CULLIN_1coord: 744..771
IPR016159Cullin repeat-like-containing domainSUPERFAMILY74788Cullin repeat-likecoord: 18..405

Blast
[Close]
BLAST of TCONS_00003285-protein vs. Swiss-Prot (Human)
Match: CUL1 (Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2)

HSP 1 Score: 1156.74 bits (2991), Expect = 0.000e+0
Identity = 559/777 (71.94%), Postives = 654/777 (84.17%), Query Frame = 0 
Query:    8 SSARSS-----KSTNLEQIWDDLKEGIQQIYLKQNMPKKRYMQLYTHVYNYCTSVQ--NQTQNQRISKRKSA---NQGGAQFVGAELYKRLKDFLKTYLTNLLRQGIDLMDESVLTFYTQQWEGYKFSSKVLHGICAYLNRHWVRRECDEGHKNTYEIYNLALVTWKDVLFKALDIKVTNAVLELIKRERNGETVNTSLISGVIDSYVHLGINEEESRSNGPTLSVYRLHFEANFLTDTEQYYTAESNAFLAENPVTEYMKRAEARLKEEQRRVQVYLHESTQIELAKKCEQVLIEKHLDTFYTEFKNLLTDDKNEDLGRMYSLTARVPDALGTLKQLLEEHIYSQGLDTIEKCGESALNDPRLYVTTMLGVHGKYHGLVSSSFNNDSGFVAALDKACGRFVNANAVTKQASSSSKSPELLARYCDSLLKKSVKNPEEAELEDILNSVMVIFKYVEDKDVFQKFYSKMLAKRLVQQNSASDDAEATVITKLRSMCGYEYTNKLQRMFLDVNVSKDLNEKFKSHIQRSETDSLNLDFSVQVLASNAWPFQQSATFALPTELEKCLQRFTTFYSAQHSGRKLHWLYTLSKGELVTNCFKNKYTLQASTYQMSVLLMYNDQDSYTVEQIHEHTQIKMDLLPQVLAILLKIRILI-SDKPMGDGQIDLNAN--IRLYKDYKNKKLRVNINVPMKTEQKQEQEQTHKFIEEDRKLLIQACIVRIMKMRKVMKHQHLLTEVLTQLSSRFKPGIPVIKKCIDILIEKEYLERVEKEKDTYSYLA 771
            SS RS      K   L+QIWDDL+ GIQQ+Y +Q+M K RYM+LYTHVYNYCTSV   NQ +   +   KS      GGAQFVG ELYKRLK+FLK YLTNLL+ G DLMDESVL FYTQQWE Y+FSSKVL+GICAYLNRHWVRRECDEG K  YEIY+LALVTW+D LF+ L+ +VTNAVL+LI++ERNGET+NT LISGV+ SYV LG+NE+++ + GPTL+VY+  FE+ FL DTE++YT ES  FL +NPVTEYMK+AEARL EEQRRVQVYLHESTQ ELA+KCEQVLIEKHL+ F+TEF+NLL  DKNEDLGRMY+L +R+ D LG LK+LLE HI++QGL  IEKCGE+ALNDP++YV T+L VH KY+ LV S+FNND+GFVAALDKACGRF+N NAVTK A SSSKSPELLARYCDSLLKKS KNPEEAELED LN VMV+FKY+EDKDVFQKFY+KMLAKRLV QNSASDDAEA++I+KL+  CG+EYT+KLQRMF D+ VSKDLNE+FK H+  SE   L+LDFS+QVL+S +WPFQQS TFALP+ELE+  QRFT FY+++HSGRKL WLY LSKGELVTNCFKN+YTLQAST+QM++LL YN +D+YTV+Q+ + TQIKMD+L QVL ILLK ++L+  D+     +++L  +  I+LY  YKNKKLRVNINVPMKTEQKQEQE THK IEEDRKLLIQA IVRIMKMRKV+KHQ LL EVLTQLSSRFKP +PVIKKCIDILIEKEYLERV+ EKDTYSYLA
Sbjct:    2 SSTRSQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE--PLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
The following BLAST results are available for this feature:
BLAST of TCONS_00003285-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CUL10.000e+071.94Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2[more]
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