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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00003402-protein ID=TCONS_00003402-protein|Name=TCONS_00003402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
HSQNNNNNKTMECVLRMNHLSTPIAYIYGTLSVLAALFATFGNITVLIIL
WKPGYRSRSNTILTSLAISDTLVGAVLFPIFSIQLLYTDLLQNCAYDYMR
EYITTVTIGSSLMTLGVVSYDRYILMTKVGKHKRIMSPRRVGILIALSWI
FPAVSPALRFLGKGPFLYCVIVITLGPLIILLFTYYRIMKCIQKSSARIG
AHGRSISDTPDISENLRASRSRNEKKNIRLARSVSVLILAYCVCLVPSSI
WSVNDLLNDSFGYTRPQVIQNLYVFACFAGSMNSCCNPIIYFFKQPGIRK
GVYKLFNVKHAGFDSSSSRGLKGAGPKSSLDCSLSNDDVISPDSSNNNPN
NGNRVKPDILLTPAHECNKYCMKL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 372..374 |
| None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 1..311
e-value: 7.1E-47
score: 159.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 314..333 |
| None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 21..316 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 104..126
score: 27.95
coord: 273..299
score: 28.09
coord: 166..189
score: 24.32
coord: 230..254
score: 18.24
coord: 59..80
score: 31.4
coord: 27..51
score: 21.48 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | SMART | SM01381 | 7TM_GPCR_Srsx_2 | coord: 36..306
e-value: 0.0013
score: -56.4 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 168..291
e-value: 1.9E-13
score: 50.2
coord: 42..154
e-value: 8.9E-12
score: 44.7 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PROSITE | PS00237 | G_PROTEIN_RECEP_F1_1 | coord: 110..126 |
| IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 42..291
score: 24.685 |
Blast
The following BLAST results are available for this feature:
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