TCONS_00003440-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003440-protein
Unique NameTCONS_00003440-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length198

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003440-protein ID=TCONS_00003440-protein|Name=TCONS_00003440-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
TESPKTTYQPPTLNPLDKCQLPDVAVSRIISGRDAKPGQFPWQVAMYVNG
HFSCGGSILKPDWLITAAHCLQGLQPSHNITFVAGELDRSVSSGHEQTSE
IEMPHIHPHYEMPISLNNDIALVKLKRPFKFNRFVQPVCIPQQHEEIAPG
SKCILSGWGRTKKDGESPNVLKYTKLYVVNQTQCVAWNRRITNYMMCG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001918XLOC_001918Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003440TCONS_00003440Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 115..129
score: 40.89
coord: 55..70
score: 51.51
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 28..198
e-value: 7.5E-34
score: 128.4
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 29..197
e-value: 1.3E-45
score: 155.8
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 29..198
score: 23.541
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 29..197
e-value: 7.32712E-63
score: 195.958
NoneNo IPR availableGENE3D2.40.10.10coord: 28..39
e-value: 3.6E-5
score: 22.9
NoneNo IPR availableGENE3D2.40.10.10coord: 40..59
e-value: 8.2E-18
score: 63.8
NoneNo IPR availableGENE3D2.40.10.10coord: 133..198
e-value: 2.3E-20
score: 72.5
NoneNo IPR availableGENE3D2.40.10.10coord: 60..132
e-value: 1.5E-26
score: 91.8
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 65..70
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 21..197

Blast
[Close]
BLAST of TCONS_00003440-protein vs. Swiss-Prot (Human)
Match: CTRB1 (Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.410e-36
Identity = 67/187 (35.83%), Postives = 113/187 (60.43%), Query Frame = 0 
Query:   19 CQLPDV-----AVSRIISGRDAKPGQFPWQVAMY-VNGHFSCGGSILKPDWLITAAHCLQGLQPSHNITFVAGELDRSVSSGHEQTSEIEMPHIHPHYEMPISLNNDIALVKLKRPFKFNRFVQPVCIPQQHEEIAPGSKCILSGWGRTKKDG-ESPNVLKYTKLYVVNQTQC-VAWNRRITNYMMC 197
            C +P +      +SRI++G DA PG +PWQV++    G   CGGS++  DW++TAAHC  G++ S  +  VAGE D+     + Q  +I     +P + + +++NNDI L+KL  P +F++ V  VC+P   ++   G+ C  +GWG+TK +  ++P+ L+   L +++  +C  +W RRIT+ M+C
Sbjct:   19 CGVPAIHPVLSGLSRIVNGEDAVPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHC--GVRTSDVV--VAGEFDQGSDEENIQVLKIAKVFKNPKFSI-LTVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGRRITDVMIC 200
The following BLAST results are available for this feature:
BLAST of TCONS_00003440-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB11.410e-3635.83Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 S... [more]
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