TCONS_00003469-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003469-protein
Unique NameTCONS_00003469-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length404

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003469-protein ID=TCONS_00003469-protein|Name=TCONS_00003469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=404bp
MIRSLSRRLRRTLSFRGRSKRKKDKTGGTVSGGASSNWENDALTIKQQGG
VSFTVKYLGCLEVSESRGTQVCSQAAHQMKMSSAGKKKQRVTLWVTEDTL
RVTDDETKSLVVDQVIEKVSFCTPDPHDEKLFSYICRDGTSRRWLCHSFK
GIKDSGERISHAVGCAFAACLAKKQQQNQNQQNLQRGTSTRKTLESRPNG
VKLPQQSVDTLQKLNETEYTARIEKANHTLNNTSTSGAMNGPADISVAAT
PAPTTPQSKQPPASAFAPRPRPSGSGSDIGGLTRHASLPYRAKKSAGSST
YQALTEDPLPPRLPTTPPPMTPNSEQEFWLNNTTPGFTATTNTTVTVQTQ
ANPFSQQPVMSTPQQPFVIQQQAGVTPIQPVPAAEQQSPNPFVNNANPFT
ERFV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001928XLOC_001928Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003469TCONS_00003469Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006020PTB/PI_dom
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006020PTB/PI domainSMARTSM00462PTB_9coord: 48..180
e-value: 1.6E-36
score: 137.3
IPR006020PTB/PI domainPFAMPF00640PIDcoord: 53..176
e-value: 5.7E-24
score: 84.6
IPR006020PTB/PI domainPROSITEPS01179PIDcoord: 49..179
score: 27.491
IPR011993PH domain-likeGENE3D2.30.29.30coord: 48..181
e-value: 2.7E-36
score: 123.9
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 33..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..208
NoneNo IPR availableCDDcd01268PTB_Numbcoord: 36..173
e-value: 4.18237E-76
score: 233.736

Blast
[Close]
BLAST of TCONS_00003469-protein vs. Swiss-Prot (Human)
Match: NUMBL (Numb-like protein OS=Homo sapiens GN=NUMBL PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.252e-52
Identity = 81/143 (56.64%), Postives = 105/143 (73.43%), Query Frame = 0 
Query:   38 WENDALTIKQQGGVSFTVKYLGCLEVSESRGTQVCSQAAHQMKMSSAGKKKQRVTLWVTEDTLRVTDDETKSLVVDQVIEKVSFCTPDPHDEKLFSYICRDGTSRRWLCHSFKGIKDSGERISHAVGCAFAACLAKKQQQNQN 180
            W+ D   +++ G  SF V+YLG +EV ESRG  VC  A  ++K  + G+K  +  LWV+ D LRV DD+TK L+VDQ IEKVSFC PD + +K FSYICRDGT+RRW+CH F  +KDSGER+SHAVGCAFAACL +KQ++ + 
Sbjct:   66 WQADEDAVRK-GTCSFPVRYLGHVEVEESRGMHVCEDAVKKLK--AMGRKSVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCAFAACLERKQRREKE 205
The following BLAST results are available for this feature:
BLAST of TCONS_00003469-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUMBL3.252e-5256.64Numb-like protein OS=Homo sapiens GN=NUMBL PE=1 SV... [more]
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