TCONS_00003472-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003472-protein
Unique NameTCONS_00003472-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length318

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003472-protein ID=TCONS_00003472-protein|Name=TCONS_00003472-protein|organism=Clytia hemisphaerica|type=polypeptide|length=318bp
MDVVNTKAIKVQIGDASVGESPPSEIKDDPITKIKPDKTNKKMNSEADDV
RFLAELTEEKYRLTHGAKVQKIPVSPLAIVYREEKIDPGGLGGDFFIGND
KIEGSGSPTLTYHEFVKWRKAVIRVSYISIFIQLVLAVTSIVEGLHVDSA
GTLGFGVETLLDIATSVVVVWHFHTVDEVFASKAKERITTTVLGIMMCLF
SIGMMAKSIYNLVQKKIPFNEFKLLLITSVAAVVFTFLGWIKLYLSQKIG
SKSVMMDAMCTFAATSMAVALMLSLTVYHFTNLWFLDGIVAIIIALVMMF
YGISALWKNYSCMKGKKF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001930XLOC_001930Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003472TCONS_00003472Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1510.10coord: 121..312
e-value: 4.0E-9
score: 35.8
NoneNo IPR availableSUPERFAMILY161111Cation efflux protein transmembrane domain-likecoord: 120..312

Blast
[Close]
BLAST of TCONS_00003472-protein vs. Swiss-Prot (Human)
Match: TM163 (Transmembrane protein 163 OS=Homo sapiens GN=TMEM163 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.461e-23
Identity = 59/213 (27.70%), Postives = 113/213 (53.05%), Query Frame = 0 
Query:   99 NDKIEGSG----SPTLTYHEFVKWRKAVIRVSYISIFIQLVLAVTSIVEGLHVDSAGTLGFGVETLLDIATSVVVVWHFHTVDEVFASKAKERITTTVLGIMMCLFSIGMMAKSIYNLVQKKIPFNEFKLLLITSVAAVVFTFLGWIKLYLSQKIGSKSVMMDAMCTFAATSMAVALMLSLTVY-HFTNLWFLDGIVAIIIALVMMFYGISAL 306
            +D +E  G    S  L  HE   +RK  + VS+ SI + L LAV +    +   SA   GF  + +LD+ +S +V+W +     V  S  +E I   +LG++  L SI ++ K+I++L  + +P  +  L  ++ ++ ++ + L  +K  L + + S++++ D   +     M  +++LS  V+ H + +W+LDG + ++I L +  YG+  L
Sbjct:   61 SDGLEDRGLLESSTRLKPHEAQNYRKKALWVSWFSIIVTLALAVAAFTVSVMRYSASAFGFAFDAILDVLSSAIVLWRYSNAAAVH-SAHREYIACVILGVIFLLSSICIVVKAIHDLSTRLLPEVDDFLFSVSILSGILCSILAVLKFMLGKVLTSRALITDGFNSLVGGVMGFSILLSAEVFKHDSAVWYLDGSIGVLIGLTIFAYGVKLL 272
The following BLAST results are available for this feature:
BLAST of TCONS_00003472-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM1637.461e-2327.70Transmembrane protein 163 OS=Homo sapiens GN=TMEM1... [more]
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