TCONS_00004655-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004655-protein
Unique NameTCONS_00004655-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004655-protein ID=TCONS_00004655-protein|Name=TCONS_00004655-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MTFRILFLVVLICYWCKCAKQTWNLIAVDKTFDDQPFYEVSLMDERQCFG
QCVYNKKCLSFEAYQTAPRKVECRLFGFTHSTTLVEKVGAKLHSKVVYKN
CLEYFRAGYIKNGVYKINLLGTLRDVYCFMEGEGGGWMAFQRRYDGSVSF
EDKGWAEYKDGFGDGSGEYWLGLEALHKLTSQQSYDLYVLAMDFTGRWEN
KRFAGFTIGPEEPEKYKFDYRSVYDGNQYSSLELFVNCKGMKFSTKLHDN
DADARNCAIVYPAGWWYKVCHADLMNGKYSQTSVCDSPVARGVHWEAFTG
HGQCLKESLLMIRPN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002625XLOC_002625Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004655TCONS_00004655Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 96..315
e-value: 1.7E-40
score: 150.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 98..314
e-value: 8.2E-47
score: 159.7
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 92..315
score: 38.613
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 92..314
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 53..243
e-value: 1.3E-42
score: 145.5
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 244..306
e-value: 2.6E-17
score: 62.2

Blast
[Close]
BLAST of TCONS_00004655-protein vs. Swiss-Prot (Human)
Match: FBCD1 (Fibrinogen C domain-containing protein 1 OS=Homo sapiens GN=FIBCD1 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 4.122e-39
Identity = 87/223 (39.01%), Postives = 122/223 (54.71%), Query Frame = 0 
Query:   99 KNCLEYFRAGYIKNGVYKI--NLLGTLRDVYCFMEGEGGGWMAFQRRYDGSVSFEDKGWAEYKDGFGDGSGEYWLGLEALHKLTSQQSYDLYVLAMDFTGRWENKRFAGFTIG-----PEEPEKYKFDYRSVYDGNQYSSLELFVNCKGMKFSTKLHDNDADARNCAIVYPAGWWYKVCHADLMNGKYSQTSVCDSPVARGVHWEAFTGHGQCLKESLLMIRP 314
            ++CL+   +G   +GVY +          VYC M  +GGGW  FQRR DGSV+F  +GW  Y+DGFG  +GE+WLGL+ +H LT+Q +Y+L+V   DF       R+  F +G     PEE + Y     + Y G    SL   +   GM+F+TK  D+D    NCA  Y   WWY+ CH   +NG+Y + +   +  A GV W ++TG    LK S + IRP
Sbjct:  242 RDCLDVLLSGQQDDGVYSVFPTHYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFF-RGWDAYRDGFGRLTGEHWLGLKRIHALTTQAAYELHVDLEDFENGTAYARYGSFGVGLFSVDPEE-DGYPLTV-ADYSGTAGDSL---LKHSGMRFTTKDRDSDHSENNCAAFYRGAWWYRNCHTSNLNGQYLRGA--HASYADGVEWSSWTGWQYSLKFSEMKIRP 456
The following BLAST results are available for this feature:
BLAST of TCONS_00004655-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBCD14.122e-3939.01Fibrinogen C domain-containing protein 1 OS=Homo s... [more]
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