TCONS_00004762-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004762-protein
Unique NameTCONS_00004762-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length221

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004762-protein ID=TCONS_00004762-protein|Name=TCONS_00004762-protein|organism=Clytia hemisphaerica|type=polypeptide|length=221bp
MATAQQVRSQTKQGQWSSIFPNEQVTETQSTLFVKKLLAVAVSSISYLRA
LFPENAFGDRCLEDVNLKILRDDNNCPEACRVIQWIRGCFDALEKKYLRA
VLVGIYEDPEDPDTVIEQYTFKFAYGDGNGIDIYRNGAKISSAKSDKETK
KATVRLLRTIVFLSQTLSPLPDDVMMTMKLVYYDEITPEDYNPPGFKECA
TDEFAFKEEPMNIKVGDVATV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002695XLOC_002695Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004762TCONS_00004762Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003511HORMA_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.900.10coord: 25..221
e-value: 1.1E-54
score: 184.5
IPR003511HORMA domainPFAMPF02301HORMAcoord: 30..220
e-value: 1.2E-62
score: 211.1
IPR003511HORMA domainPROSITEPS50815HORMAcoord: 28..221
score: 38.651
IPR003511HORMA domainSUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 24..203

Blast
[Close]
BLAST of TCONS_00004762-protein vs. Swiss-Prot (Human)
Match: HORM1 (HORMA domain-containing protein 1 OS=Homo sapiens GN=HORMAD1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.015e-71
Identity = 108/221 (48.87%), Postives = 151/221 (68.33%), Query Frame = 0 
Query:    1 MATAQQVRSQTKQGQWSSIFPNEQVTETQSTLFVKKLLAVAVSSISYLRALFPENAFGDRCLEDVNLKILRDDNNCPEACRVIQWIRGCFDALEKKYLRAVLVGIYEDPEDPDTVIEQYTFKFAY-GDGNGIDIYRNGAKISSAKSDKETKKATVRLLRTIVFLSQTLSPLPDDVMMTMKLVYYDEITPEDYNPPGFKECATDEFAFKEEPMNIKVGDVAT 220
            MATAQ  R+       + +FPN+  TE QS + VK+LLAV+VS I+YLR +FPE A+G R L+D+ +KILR+D NCP + ++++W+ GC+DAL+KKYLR V++ +Y +PEDP T+ E Y FKF Y  +G  +D         S+    +TKKA++ L+R I  L Q L PLP+DV +TMKL YYDE+TP DY PPGFK+   +   F+ EPM + VG+V+T
Sbjct:    1 MATAQLQRTPMS----ALVFPNKISTEHQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKWMLGCYDALQKKYLRMVVLAVYTNPEDPQTISECYQFKFKYTNNGPLMDFISKNQSNESSMLSTDTKKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPPGFKDGDCEGVIFEGEPMYLNVGEVST 217
The following BLAST results are available for this feature:
BLAST of TCONS_00004762-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HORM17.015e-7148.87HORMA domain-containing protein 1 OS=Homo sapiens ... [more]
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