TCONS_00004867-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004867-protein
Unique NameTCONS_00004867-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length452

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004867-protein ID=TCONS_00004867-protein|Name=TCONS_00004867-protein|organism=Clytia hemisphaerica|type=polypeptide|length=452bp
MAVNNPSLSSSSEALSDMSADEGGIMSKGASQENRITSLEQQNRVLKMEL
EMYKLRCKQMQEENKNLRQASVSIQAKAEQEEEFISNTLMKKINSLKKEK
EVLAMNYEQEEEYLTNDLSKKLMQLRQEKVNLEQTLEREQEFQVNKLIRR
IEKLEAETLAKQQTLEQLRKEKVDLENTLEQEQEALVNRLWIRMEKLETE
KRMLQGKLDQPLSEPASPRKIELQEINVEDLSVNVNVLRDEVIKLRKQLV
AAQQEHTKDMTKFETEEHHLREENVRLQRKLLLEMERREQLSRQLSESES
SLEMDDERHFNELTAHGGSSGFRDRAISSPIPYPSPTSTNTANAFTPHQR
PKSPTNVAGSSSSTHPTPPNSYTAFTPPSPLGSGRASSNSSTTGSSPPFI
HKVPRPLTQSPKLPRKMGLPKERPLSGNISERQRAGHIRTSSNTSDRPTS
GN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002757XLOC_002757Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004867TCONS_00004867Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..113
NoneNo IPR availableCOILSCoilCoilcoord: 221..255
NoneNo IPR availableCOILSCoilCoilcoord: 36..77
NoneNo IPR availableCOILSCoilCoilcoord: 115..185
NoneNo IPR availableCOILSCoilCoilcoord: 260..294
NoneNo IPR availableGENE3D1.20.1170.10coord: 219..393
e-value: 0.0016
score: 16.9
coord: 7..212
e-value: 0.041
score: 12.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..452
IPR019152Protein of unknown function DUF2046PFAMPF09755DUF2046coord: 18..310
e-value: 5.0E-133
score: 442.9

Blast
[Close]
BLAST of TCONS_00004867-protein vs. Swiss-Prot (Human)
Match: CCDC6 (Coiled-coil domain-containing protein 6 OS=Homo sapiens GN=CCDC6 PE=1 SV=2)

HSP 1 Score: 377.867 bits (969), Expect = 1.592e-127
Identity = 191/284 (67.25%), Postives = 245/284 (86.27%), Query Frame = 0 
Query:   34 NRITSLEQQNRVLKMELEMYKLRCKQMQEENKNLRQASVSIQAKAEQEEEFISNTLMKKINSLKKEKEVLAMNYEQEEEYLTNDLSKKLMQLRQEKVNLEQTLEREQEFQVNKLIRRIEKLEAETLAKQQTLEQLRKEKVDLENTLEQEQEALVNRLWIRMEKLETEKRMLQGKLDQPLSEPASPRKIELQEINVEDLSVNVNVLRDEVIKLRKQLVAAQQEHTKDMTKFETEEHHLREENVRLQRKLLLEMERREQLSRQLSESESSLEMDDERHFNELTAHG 317
            NR+ SL+Q+N+VLK+ELE YKL+CK +QEEN++LR+ASV+IQA+AEQEEEFISNTL KKI +L+KEKE LA+NYE+EEE+LTN+LS+KLMQL+ EK  LEQ LE+EQEFQVNKL+++I+KLE +T++KQ TLEQLR+EK+DLENTLEQEQEALVNRLW RM+KLE EKR+LQ KLDQP+S P SPR I ++  + E++  ++  L++EV +L+KQL AAQ +H++ M ++  EE H+REEN+RLQRKL  EMERRE L RQLSESESSLEMDDER+FNE++A G
Sbjct:   61 NRLASLQQENKVLKIELETYKLKCKALQEENRDLRKASVTIQARAEQEEEFISNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEALVNRLWKRMDKLEAEKRILQEKLDQPVSAPPSPRDISMEIDSPENMMRHIRFLKNEVERLKKQLRAAQLQHSEKMAQYLEEERHMREENLRLQRKLQREMERREALCRQLSESESSLEMDDERYFNEMSAQG 344
The following BLAST results are available for this feature:
BLAST of TCONS_00004867-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCDC61.592e-12767.25Coiled-coil domain-containing protein 6 OS=Homo sa... [more]
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