TCONS_00004892-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004892-protein
Unique NameTCONS_00004892-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length683

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004892-protein ID=TCONS_00004892-protein|Name=TCONS_00004892-protein|organism=Clytia hemisphaerica|type=polypeptide|length=683bp
MKLLVTLCFFAVFSYNVALPATTTAHKAKSTIPVITTTVAAPTEPETTTA
APTTTAAAPTTTAAAPKTTTAAPTTTAAAPTNTTAAPKTTTAAPKTTTAA
PTTTAAAPETTAAAPTNTTTAPTTTTTAPTTTTTTPAPTINPFCIGKVEF
NADPKNCSQFIRCPRTGKLKGHAVVYHCPPTLVFNVAGEYCDWPRNVKCK
DGIRPTKRPRTTTPPKVTKPATTAAATTEAPTTTEAPTTTAKAPTTTTKA
APTTTAAKETTTAAAKETTTAAAKETTTAAAKETTTAAAKETTTAAAKET
TTAEAKETTTAAAKETTTAAAKETTTAAAKETTTAAAKETTTAAAKETTT
TAPTTTTTATTTISTTTPDPFCIGKPERNIFPGSCHKYITCIDGKKGVVN
CWWYKYDPTLKKCVNPHSVLCKDGEFFTTTTTTTTTTTTTPFTGSTIPTT
RPKTTKSVCAKSGEYYIRDSKDCSKFIHCQGSRPTFKTCPGVLVFDVEKN
VCNWRFAVDCGDATTAAPVTTTTKAPATTRKPETTIAAPKTTTKAPATTQ
KAPKTTTVAAPETTTVAAPATTTAAAPETTTKAPKTTTAAPKTTTVAAPE
TTTTVAAPETTVKIATTKAKPTTTEAQSLCKGKSGPVPHPKDCTKYFQCV
HGRSYDRSCPTGLHFDKKNGYCNWPAVAKCSTH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002769XLOC_002769Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004892TCONS_00004892Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 142..201
e-value: 3.6E-10
score: 49.8
coord: 370..423
e-value: 4.6
score: 12.3
coord: 628..682
e-value: 5.6E-16
score: 69.1
coord: 457..512
e-value: 3.9E-10
score: 49.7
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 459..510
e-value: 1.6E-10
score: 40.9
coord: 630..680
e-value: 1.2E-12
score: 47.7
coord: 150..199
e-value: 6.5E-9
score: 35.7
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 355..435
e-value: 2.2E-4
score: 20.5
coord: 448..523
e-value: 9.7E-15
score: 53.7
coord: 125..211
e-value: 5.0E-12
score: 45.0
coord: 619..683
e-value: 2.1E-16
score: 59.0
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 369..423
score: 7.342
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 627..682
score: 14.877
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 141..201
score: 11.452
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 456..512
score: 12.936
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 142..206
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 366..432
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 627..682
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 454..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 570..596
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..557
NoneNo IPR availableSUPERFAMILY69349Phage fibre proteinscoord: 254..372

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004892-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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