TCONS_00004897-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004897-protein
Unique NameTCONS_00004897-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length417

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004897-protein ID=TCONS_00004897-protein|Name=TCONS_00004897-protein|organism=Clytia hemisphaerica|type=polypeptide|length=417bp
MKRNFESIKLDDDEDDDVLIVSSYKRDQQNPASQPSTTALTSATPATSST
ITTITTSIPKTITITLGSSLKAPSSATNTLPGPSSLSHPPFRPVQVFAGP
SSIRSGLMSFNPGSSASSPKSSFLINSIRMGPPYPSGIRNRIPVRPPVQK
FQPGPARPMSFRHRFFNPQETSQPYVSTIDLLDTDSSGGPSTDHSSDGED
DNASTSSNTNDAPPESTQSKKSTLIDSSKKVSPDQKTKSSGMRSSASSKI
IEPIIIEDSPPSSPSYSPECSPPHTSEDQVKPTQNKKVKVGMGITYGAQA
EPQVDAISKETERMLQNLLPSEESGENDEELSNLLKTGMNMIDPEDLLQK
MKQLPNDKPKRLYIKGLYSQAKHGNIPRVLSFLYGGTNPCGIVKNEEGKT
PLHIAASKGHLEILLLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002772XLOC_002772Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004897TCONS_00004897Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13637Ank_4coord: 369..417
e-value: 4.5E-5
score: 23.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..46
NoneNo IPR availableCDDcd00204ANKcoord: 371..417
e-value: 2.77961E-7
score: 47.3782
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 351..417
e-value: 4.0E-7
score: 29.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 397..417
score: 11.718
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 367..417
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 397..417
score: 11.755

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004897-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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