TCONS_00005199-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005199-protein
Unique NameTCONS_00005199-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length345

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005199-protein ID=TCONS_00005199-protein|Name=TCONS_00005199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
MVTINNQLILDEEYDENYIPTEEEIFEYARVIDIDPEREPELMYIARQGI
VAPLPADWKPCQDPSGEIYYFNFSSGDSVWDHPCDEHFREMVAKERDMLK
NKKQSSKKQGKEPKKNKDKKAKKDAKNSVVTSTPTLGQLKPIGGKLDGLS
SGNLAPVKSAASKQLGPLTGLDKPKTLSTAVSTSNKKNNDNFQMSRGTGE
KVNFLEQLSDMSEYSDGKPKFTLDVDDKYDIANLGFEDSDGISADQPPDY
LDVKSDESRGDEDDDELDFGISAGLAARLDGMSIENLGGFNSYQEGSDES
EFDIKQSSREDINMLNISQPTINTSFDQMKGSSIDVDDGRKQRAD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002955XLOC_002955Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005199TCONS_00005199Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 53..85
e-value: 6.5E-5
score: 32.3
IPR001202WW domainPFAMPF00397WWcoord: 54..83
e-value: 8.9E-8
score: 32.0
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 52..85
score: 12.905
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 43..84
NoneNo IPR availableGENE3D2.20.70.10coord: 51..122
e-value: 2.7E-9
score: 36.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..144
NoneNo IPR availableCDDcd00201WWcoord: 55..85
e-value: 4.95262E-7
score: 44.8262

Blast
[Close]
BLAST of TCONS_00005199-protein vs. Swiss-Prot (Human)
Match: CE164 (Centrosomal protein of 164 kDa OS=Homo sapiens GN=CEP164 PE=1 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 5.916e-44
Identity = 63/98 (64.29%), Postives = 84/98 (85.71%), Query Frame = 0 
Query:    2 VTINNQLILDEEYDENYIPTEEEIFEYARVIDIDPEREPELMYIARQGIVAPLPADWKPCQDPSGEIYYFNFSSGDSVWDHPCDEHFREMVAKERDML 99
            + I +QL+L+E+YDE YIP+E+EI E+AR I IDP +EPELM++AR+GIVAPLP +WKPCQD +G+IYYFNF++G S+WDHPCDEH+R +V +ER  L
Sbjct:    6 LRIGDQLVLEEDYDETYIPSEQEILEFAREIGIDPIKEPELMWLAREGIVAPLPGEWKPCQDITGDIYYFNFANGQSMWDHPCDEHYRSLVIQERAKL 103
The following BLAST results are available for this feature:
BLAST of TCONS_00005199-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CE1645.916e-4464.29Centrosomal protein of 164 kDa OS=Homo sapiens GN=... [more]
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