TCONS_00048037-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048037-protein
Unique NameTCONS_00048037-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length392

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048037-protein ID=TCONS_00048037-protein|Name=TCONS_00048037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=392bp
NQRITIKQRYKTSAKKEQRIPRTAFWANEIAQSGGHWSFSGITTLQSNDT
TITSSVHHLTSFAVLVQVTDFEISEEHQLALSIITYVGCGFSLFAYLLTF
GTLASIEALASERSRVHLNLVLALGIGQAIFLLGISATGNTAVCTGIAVS
LHYFFTAGFSWMLVEGLVLYSKVVRVFHNGKNYIKYYLCIGWGLPAILVG
ISTAIKSDGYGNDRYCWISIEDGLVWAFVGPVVAVILINLFILVWVIKIL
MTSVSGPVSTHPKTKEQIRAAIKGILMLTPILGITWVFGMFAVDSKTIVM
QYIFTIFNAFQGLVIFGFYCIGNNEVQTALKRLHLKHTENFTSSLFRNTN
TTSDSIELSTAKHKKKMKSIQTKIENSPQNSPSSGFGYKNYR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030566XLOC_030566Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048037TCONS_00048037Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000203GPS
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000832GPCR, family 2, secretin-likePRINTSPR00249GPCRSECRETINcoord: 83..107
score: 23.8
coord: 184..209
score: 28.29
coord: 301..322
score: 29.35
coord: 226..251
score: 33.44
coord: 146..169
score: 36.86
coord: 271..291
score: 33.98
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 80..315
e-value: 2.0E-62
score: 210.6
NoneNo IPR availableGENE3D1.20.1070.10coord: 64..360
e-value: 3.6E-42
score: 143.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..392
IPR000203GPS motifPFAMPF01825GPScoord: 24..65
e-value: 5.1E-5
score: 23.7
IPR000203GPS motifPROSITEPS50221GPScoord: 20..71
score: 9.656
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 81..323
score: 39.458

Blast
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BLAST of TCONS_00048037-protein vs. Swiss-Prot (Human)
Match: AGRD1 (Adhesion G-protein coupled receptor D1 OS=Homo sapiens GN=ADGRD1 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 6.206e-71
Identity = 131/352 (37.22%), Postives = 195/352 (55.40%), Query Frame = 0 
Query:    2 QRITIKQRYKTSAKKEQRIPRTAFWANEIAQSGGHWSFSGITTLQSNDTTITSSVHHLTSFAVLVQVTDFEISEEHQLALSIITYVGCGFS---LFAYLLTFGTLASIEALASERSRVHLNLVLALGIGQAIFLLGISATGNTAVCTGIAVSLHYFFTAGFSWMLVEGLVLYSKVVRVFHNGKNYIKYYLCIGWGLPAILVGISTAIKSDGYGNDRYCWISIEDGLVWAFVGPVVAVILINLFILVWVIKILMTSVSGPVSTHPKTKEQIRAAIKGILMLTPILGITWVFGMFAVDSKTIVMQYIFTIFNAFQGLVIFGFYCIGNNEVQTALKRLHLKHTENFTSSLFRNTN 350
             R+T KQ  + +    +     AF   + +   G WS  G    + N T       HLT+FA+L+QV   E++  HQ+ALS I+YVGC  S   L A L+TF  L+S+  + ++R  +H NL  A+ + Q + L+       T  C  +AV LHYFF + F+WMLVEGL LYS V++VF +  +  +YY  +GWG P ++  IS +   D YG    CW+S+  G +WAFV P + VI++N+ IL+ V +++    +     H       +   K + +L PILG +WVFG+ AV+   +V QY+F   N+ QGL IF F+C+ N+EV+ A K  H     + TSS  R +N
Sbjct:  489 HRLTRKQHSEATNSSNRVFVYCAFL--DFSSGEGVWSNHGCALTRGNLTYSVCRCTHLTNFAILMQVVPLELARGHQVALSSISYVGCSLSVLCLVATLVTFAVLSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFRLEPGTTPCQVMAVLLHYFFLSAFAWMLVEGLHLYSMVIKVFGSEDSKHRYYYGMGWGFPLLICIISLSFAMDSYGTSNNCWLSLASGAIWAFVAPALFVIVVNIGILIAVTRVISQISADNYKIH-GDPSAFKLTAKAVAVLLPILGTSWVFGVLAVNGCAVVFQYMFATLNSLQGLFIFLFHCLLNSEVRAAFK--HKTKVWSLTSSSARTSN 835
The following BLAST results are available for this feature:
BLAST of TCONS_00048037-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRD16.206e-7137.22Adhesion G-protein coupled receptor D1 OS=Homo sap... [more]
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