TCONS_00048169-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048169-protein
Unique NameTCONS_00048169-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1651

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048169-protein ID=TCONS_00048169-protein|Name=TCONS_00048169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1651bp
MVVFKEIDSKILPLAVQKYLWDQISTVFQLKTQHASQETLATTGTVCQRL
EKMLVHNKVKELQKFFSPELFSEIKSIPRWTFIKGSLSYVIHCVAMILEK
RYVLGMTDQLKPFVIKLLYTLHWIVTEAYKECSKPKDEGLDLTDIELFLH
MCIPFLSNLNESDLTHSLQSGMHLWQPLWNNIPPRDTLLALPVIKPKDHS
TFTSGKEEIPTFYTTATYFDIALVKVMMVDHWTLYGYRWGLQYLQNHFQN
ILFKLGFDCENCEVIKAINRFTHRKSVLLTMDSQGEMKPADIFSNSDPTA
FPPLSETVPESLKMYVDKEGALRTEFLLQLIEKLVKNPNIHQLSGSLLFV
HSQIVEISLDDQNIFKMLLKHFSPLLYCQVKIMQLFGCERNCGIGIRGKA
ENYRYLAHSYLKRIIYADKEKAEEWFINFVATEKVEDSLHLLHALFGICE
SSPHQQIGKSTLRLLIDDDGQSQQQEKYLENRASNEKNIIEWVTPSLIKF
IFLKWKKEKSSNHMEMFTLAHHFIQFVQVKHPMIFRKLIMSGLLDSFTKT
TNPPTATSQDSFNASVFSNGSSLNSSSSPSNENTASGGGGGKKWRRGGEI
LKMMHAKQKTEDVEVSFATLPRNTTQSSQNASSVFSTSLPRNFSMSDDSK
SPKGGAQIRTKWGKSTNMHGLLAGVQQLRCLFDLMSPGVLPDELIVGALL
DLEAPVVSRASYLMELAYFVNKCNKEDWPMLLELMKSGHIKTSIHELTAT
KLQAGRLFYKWGIVIGRKLEDMLNEDRMSLEDLSKPVKREKVNFLYQGDI
GSVSSYCPQSLRFVACHLLKEITAYLRERHASLIAAQIPLDNDSPMTFHR
EISHSSSAASSRRPKQSIASALSKKIIEVKRKKSSVNLLVGSASNPDGRD
SPSSSPSPNRHIPARKKSTSNVFRSRSPKFGRRYSKQTSRLPLEDQNIDS
LLVDSEETSEFPWLSVIIDMNRSINFLCVHSTTQCPEDCPLEQVKSCNTL
LHALKLLYEPGRLDDKELDHVDSTHAQKKDVVYEYITKQVGSFYHVPYSV
LCKGAFVMDNQQLSDIVAASWEVLLYPDEQLKSAAACLFLVAASKMEATV
STFLTKELTCSGDIDRAKAIQRYEVLWNCRKTVYNHLEETSKTALKVPFP
KIEYTVPSRFIGQQPDPEQLPDAPWNPDEQAFNELDVSDDEVSLYFHDSE
KQKKIKQERRLKKLKRMREDFPITSVPLNLDASVETWMVEEIADENTPKE
TNAMACQIATAHQPFFPPAMNVGILRIIPLLDDASITTINSQSVGDLAHS
LVWYCLVDDPQTFFRRFFEKITNKNKQEELILLLRKLLFHIPKLPGNAAV
ILFNNLIGLISFYERTNDKAQRMLYHDKIAEIMPLLWQIVPSVDKLYFNE
MKQILRREHIDHTLMVTANVGCVKELIVLGHGNKRENLNIMDEMTFKELL
TQMKGAFEIEAGNYWLVDKYSGLLLENNAKIRDVYVFKRGYQCPVLKLEE
LSDGFVLSKRQQQAKTGKQMSLNQLLLTMSIFDVLPNKKHVMFLHSELYQ
QASFPRKAIEVDYELCYAPELGKEILDLDIIYKNTWVKFINSLLGHLSTM
HHFGEDAIGIFLEPINGALLLHCEDVMILRSSIAALINVAREYGKKFSND
G
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030655XLOC_030655Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048169TCONS_00048169Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031542UNC80_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1197..1217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 889..938
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 621..657
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 847..866
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 568..595
IPR031542Cation channel complex component UNC80, N-terminalPFAMPF15778UNC80coord: 11..187
e-value: 9.2E-35
score: 119.8

Blast
BLAST of TCONS_00048169-protein vs. Swiss-Prot (Human)
Match: UNC80 (Protein unc-80 homolog OS=Homo sapiens GN=UNC80 PE=1 SV=2)

HSP 1 Score: 377.481 bits (968), Expect = 3.267e-106
Identity = 311/1114 (27.92%), Postives = 494/1114 (44.34%), Query Frame = 0
Query:  663 GKSTNMHGLLA---GVQQLRCLFDLMSPGVLPDELIVGALLDLEAPVVSRASYLMELAYFVNKCNKEDWPMLLELMKSGHIKTSIHELTA-----------TKLQ--AGRLFYKWGIVIGRKLEDMLNEDRMSLEDLSKPVKREKVN-----------FLYQGDIGSVSSYCPQSLRFVACHLLKEITAYLRERHASLIAAQIPLDNDSPMTFHREISHSSSAASSRRPKQSIASALSKKIIEVKRKKSSVNLLVGSASNPDGRDSPSSSPSPNRHIPARKKSTSNVFRSRSPKFGRRYSKQTSRLPLEDQNIDSLLVDSEETSEFPWLSVIIDMNRSINFLCVHSTTQCPEDCPLEQVKSCNTLLHALKLLYEPGRLDDKELDHVDST------------------------------HAQKKDVVYEYITKQVGSFYHVPYSVLCKGAFVMDNQQLSDIVAASWEVLLYPDEQLKSAAACLFLVAASKMEATVSTFLTKELTCSGDIDRAKAIQRYEVLWNCRKTVYNHLEETSKTALKVPFPKIEYTVPSRFIGQQPDPEQLPDAPWNPDEQAFNELDVSDDEVSLYFHDSEKQKKIKQERRLKKL------KRM-REDFPITSVPLNLDASVE---------------------------------------------TWMV--------EEIADENTPKETNAMACQIATAHQPFFPPAMNVGILRIIPLLDDASITTINSQSVGDLAHSLVWYCLVDDPQTFFRRFFEKITNKNKQEELILLLRKLLFHIPKLPGNAAVILFNNLIGLISFYERTNDKAQRMLYHDKIAEIMPLLWQIVPSVDKLYFNEMKQILRREHIDHTLMVTANVGCVKELIVLGHG--NKRENLNIMDEMTFKELLTQMKGAFEI---EAGNYWLVDKYSGLLLENNAKIRDVYVFKRGYQCPVLKLEELSDGFVLSKRQQQAKTGKQMSLNQLLLTMSIFDVLPN---KKHVMFLHSELYQQASFPRKAIEVDYELCYAPELGKEILDLDIIYKNTWVKFINSLLGHLSTMHHFGEDAIGIFLEPINGALLLHCEDVMILRSSIAALINVAREYGKKFSNDG 1651
            GKS N+  L A   G+++ + L +   PG +PD  I+ A LDLEAPVV+RA+  +E A FV++CN+ +WP   E MK  H+  +   L+             KLQ  A +LFY+WG  IG +L ++ + +  S  +L   +  E+             FL    +      CP +L+  AC LL EIT +LRE  + L     P     P+                  +  +   L +   E  RK S   +L     N D +DS  SS           KS + V      K G  +S   S   +E + + +   +        WL V+I +    +F+C H    C   C L   +SC  L+ A+KLLY       +E  ++ S                                 +K   + +YI  QV S    P S+L K A ++  +   DI  A+WE+LL  DE +  AAA +FL+ A K+   VS  L  E      + R  A+ ++  LW  R  V+  +EE ++   K+P P I +T+PS  +G    P  + D PW P      +  +++D+   +   +  +   + E  LK L      KR+ RE   IT++P+  +A  E                                              W V        EE   E+TP         +    Q  FP  +   +L I+ L++D  +   +  +V  +A  ++W CL++DP T  R F EK+T  N+Q+EL+ +LRKLL +I   P   + ILFN L+GLI ++ RT  +       D I+  +  LW++V  V+ L+F ++KQ +++E  +  L+VTA++   K L+V G    +    L + ++  F+ LL +    F I   ++ +Y+L+DK   L+  N   +RD+Y F+R    P L L  +         Q+Q  T K   + ++L  +S+   +P    + HV  L  +L +  SFPR AI+ ++ L   P+ GKE+  LD + K+ W++ +  +   + +   +G D I +FL   NGAL+LH ED  +LR   A +IN A  +   FS  G
Sbjct: 1169 GKSKNVVNLGAIRQGMKRFQFLLNCCEPGTIPDASILAAALDLEAPVVARAALFLECARFVHRCNRGNWP---EWMKGHHVNITKKGLSRGRSPIVGNKRNQKLQWNAAKLFYQWGDAIGVRLNELCHGESESPANLLGLIYDEETKRRLRKEDEEEDFLDDSTVNPSKCGCPFALKMAACQLLLEITTFLRETFSCL-----PRPRTEPLVDLESC------------RLRLDPELDRHRYE--RKISFAGVL---DENEDSKDSLHSSSH-------TLKSDAGV---EEKKEGSPWS--ASEPSIEPEGMSNAGAEENYHRNMSWLHVMILLCNQQSFICTH-VDYCHPHCYLHHSRSCARLVRAIKLLYGDSVDSLRESSNISSVALRGKKQKECSDKSCLRTPSLKKRVSDANLEGKKDSGMLKYIRLQVMSLSPAPLSLLIKAAPILTEEMYGDIQPAAWELLLSMDEHMAGAAAAMFLLCAVKVPEAVSDMLMSEFHHPETVQRLNAVLKFHTLWRFRYQVWPRMEEGAQQIFKIPPPSINFTLPSPVLGMPSVP--MFDPPWVPQCSGSVQDPINEDQSKSFSARAVSRSHQRAEHILKNLQQEEEKKRLGREASLITAIPITQEACYEPTCTPNSEPEEEVEEVTNLASRRLSVSPSCTSSTSHRNYSFRRGSVWSVRSAVSAEDEEHTTEHTPNH------HVPQPPQAVFPACICAAVLPIVHLMEDGEVRE-DGVAVSAVAQQVLWNCLIEDPSTVLRHFLEKLTISNRQDELMYMLRKLLLNIGDFPAQTSHILFNYLVGLIMYFVRTPCE----WGMDAISATLTFLWEVVGYVEGLFFKDLKQTMKKEQCEVKLLVTASMPGTKTLVVHGQNECDIPTQLPVHEDTQFEALLKECLEFFNIPESQSTHYFLMDKRWNLIHYNKTYVRDIYPFRRSVS-PQLNLVHMHPEKGQELIQKQVFTRKLEEVGRVLFLISLTQKIPTAHKQSHVSMLQEDLLRLPSFPRSAIDAEFSLFSDPQAGKELFGLDTLQKSLWIQLLEEMFLGMPSEFPWG-DEIMLFLNVFNGALILHPEDSALLRQYAATVINTAVHFNHLFSLSG 2229          

HSP 2 Score: 103.605 bits (257), Expect = 7.917e-22
Identity = 63/218 (28.90%), Postives = 97/218 (44.50%), Query Frame = 0
Query:   12 LPLAVQKYLWDQISTVFQLKTQHASQETLATTGTVCQRLEKMLVHNKVKELQKFFSPELFSEIKSIPRWTFIKGSLSYVIHCVAMILEKRYVLGMTDQLKPFVIKLLYTLHWIVTEAYKECSKPKDEGLD---------------------------------------------LTDIELFLHMCIPFLSNLNESDLTHSLQSGMHLWQPLWNNIPP 184
            +PL +Q +LW Q S   + K     + +       C   E++LV NK+  L    SP L   I+SI RW  ++ +L +V+HC A +L  R  LG  D+L     KLL+TLHW++ EA ++C+  +  G D                                             +  +ELF+ +  P +  + ESDLT  L SG+ +WQP+W +  P
Sbjct:   18 IPLPIQTFLWRQTSAFLRPKLGKQYEAS-------CVSFERVLVENKLHGL----SPALSEAIQSISRWELVQAALPHVLHCTATLLSNRNKLGHQDKLGVAETKLLHTLHWMLLEAPQDCNNERFGGTDRGSSWGGSSSAFIHQVENQGSPGQPCQSSSNDEEENNRRKIFQNSMATVELFVFLFAPLVHRIKESDLTFRLASGLVIWQPMWEHRQP 224          
The following BLAST results are available for this feature:
BLAST of TCONS_00048169-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UNC803.267e-10627.92Protein unc-80 homolog OS=Homo sapiens GN=UNC80 PE... [more]
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