TCONS_00048263-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00048263-protein
Unique Name	TCONS_00048263-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	765

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00048263-protein ID=TCONS_00048263-protein|Name=TCONS_00048263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=765bp
MYRCGIRSSRSLQSNSHARSLLSKNKNGQVLLKHANSTKTSGGSSGLYIG
ATVTTISGLVGGTAAYAGQNAEFRRSIEDALPFSKPLFDMIHGDIPQKKT
LVPVEVDLSIPFVPEVLKEESTVPPMLADDSTNETFSNEVISVDTAPVLN
VENEFKGEQEVAATSSEESTMEETEVAVVTEETLVVESKSTIEETFDIPS
DAEIEEVNAAQVVSSELPTAPEVVEAKKIEEAPLTEEEIANLAKLVDKEA
LEVLLSASKGSVELLSDRVDQLHKNAASALRQYLNAFAAVMPVTMSDEGY
EEKVQELVQIEHTAQSLVDVAKDSELALLQEIESLKTLVEKVRENDTSQV
ADDAEKVALERKDSLLVALSAIESVQKDFDFLLKYQEYVKDAPTELQKDL
KSFASDMLTLIQDKEMVISELPYNQAILMLALKRQQLYSDVGEQAKGLAE
EEVDRLLDEQKDELEKLASQAMKVELKRVEDEKNEERETKVKELEENYER
EILSQLKRQAMAHNEHLAEELAGQAKTLDEKHQTEQQAKLDEQKEIYYRE
LEKKVKSISAIQAKISDIVDVESRQRNAQELWIASQALNGTLGVTTLNGR
TRTLMPEMIAILQLGERDTTLAEIVDSFPEQATLFGVVPEKDLINRFKHV
KDACKRVAAVQDGDSIVKYFMSYVKSMFVISRWYLTDVDQAVDMDKLTSY
EVLAKAEHYIREGDLETATKLMSQLKGVARKLSSDWLNEARLLLETKQTA
LLLQAYAASLQAGLE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030724	XLOC_030724	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00048263	TCONS_00048263	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019133	Mt-IM_prot_Mitofilin

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 262..282
None	No IPR available	COILS	Coil	Coil	coord: 450..504
IPR019133	Mitochondrial inner membrane protein Mitofilin	PFAM	PF09731	Mitofilin	coord: 49..758 e-value: 1.5E-79 score: 268.4

Blast

[Close]

BLAST of TCONS_00048263-protein vs. Swiss-Prot (Human)
Match: MIC60 (MICOS complex subunit MIC60 OS=Homo sapiens GN=IMMT PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.687e-34
Identity = 125/471 (26.54%), Postives = 232/471 (49.26%), Query Frame = 0

Query:  318 VDVAKDSELALLQEIESLKTLVEKVRENDTSQVADDAEKVALERK-DSLLVAL----SAIESVQKDFDFLLKYQEYVKDAPTELQKDLKSFASDMLTLIQDKEMVISELP-------YNQAILMLALKRQQLYSDVGEQAKGLAEEEVDRLLDEQKDELEKLASQAMKVELKRVEDEKNEERETKVKELEENYEREILSQLKRQAMAHNEHLAEELAGQAKTLDEKHQTEQQAKLDEQKEIYYRELEKK------------VKSISAIQAKISDIVDVESRQRNAQELWIASQALNGTLGVTTLNGRTRTLMPEMIAILQLGERDTTLAEIVDSFPEQATLFGVVPEKDLINRFKHVKDACKRVAAVQDG-DSIVKYFMSYVKSMFVISRWYLTDVDQAVDMDKLTSYEVLAKAEHYIREGDLETATKLMSQLKGVARKLSSDWLNEARLLLETKQTALLLQAYAASLQAG 763
            VD A D+ L   +E+E +K+++E  ++ + +         A E K  +++V L      +++ Q +   + +Y E V  A  + +++L S   ++L     K M +S+L         N  I     +  QL  ++ EQ K   ++ +   L++QK E ++    A+   L+    E   E++ K++E+ +  E E+ +QL+RQA AH +HL + L  Q + L  + +     KL EQ E+ +R L ++               +  I+  +      E   R A +LW++ +AL  ++  ++    T  L   + AI      +     +  + P ++   GV  E+ L  RF  V+   +RVA + +  +S+ +YF+SY++S+ +     L    +    D + ++++L+ A + I  GDLE A K ++QLKG +R+++ DWL EAR+ LETKQ   +L AYA+++  G
Sbjct:  288 VDEAADALLKAKEELEKMKSVIENAKKKEVA--GAKPHITAAEGKLHNMIVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVLPGW--KGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELAEQ-KATEKQHITLALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMRTQLRRQAAAHTDHLRDVLRVQEQELKSEFEQNLSEKLSEQ-ELQFRRLSQEQVDNFTLDINTAYARLRGIEQAVQSHAVAEEEARKAHQLWLSVEALKYSMKTSSAETPTIPLGSAVEAIKANCSDNEFTQALTAAIPPESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFLSYLQSLLLFPPQQLKPPPELCPED-INTFKLLSYASYCIEHGDLELAAKFVNQLKGESRRVAQDWLKEARMTLETKQIVEILTAYASAVGIG 751

The following BLAST results are available for this feature:

BLAST of TCONS_00048263-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00048263-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MIC60	3.687e-34	26.54	MICOS complex subunit MIC60 OS=Homo sapiens GN=IMM...	[more]

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TCONS_00048263-protein (polypeptide) - C. hemisphaerica