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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00048354-protein ID=TCONS_00048354-protein|Name=TCONS_00048354-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1423bp
MLSATNKTQNATPQTDPIGQSVISVINGTEMENKVKNTNNATLNVAAKEE
RSGIYGDTRTLPVNADHHNVFIYLKSNDEGTEGTAKKKKKKKKEYAKEEG
IVIGPIDGPLPEEHHGNGPQEKETKDLHQGNIQPTKSPVNEMRKPKGARR
PKRFTYDFNSNNNNVRRNSLYEPDINQLERLSGRSSLANELESPSRYPER
SRSSSASSSYDNYFADQMKRAEMPSSNYFSSSTREKPNIGMYSTNPSSPN
DAEITNLLKNDKDLQQLARLMPAGTKVMMNGDTQDTTANVNGVSIRGQVP
ELASRYEEQRPESRQLYDGYPRQVNEEQQQMDGLVEQYRKGNSEDSLYKL
MEQQKVGQESTNYGETEMAGNRDGLSYGGQEYTGRRHKHNRGSRYGGHVE
DLGQRAQSYGDETVASQVEKYRNYGGGDAGRRSYGGSSIQQLQEEQYQRQ
LQEQEQERQNQQEYYSPLRDQREETGLGRNQLQSLGDYSAGQTQAAQSEE
SYQSEEGGSEMNSFLNTRDSTRESNVGKYGGGSYEEYNQGQHKPASDISD
RELISKLLDMLREKEHSNDVAQTESNYNFQHHMESNQFLPTPGSFSPYNP
QEEFAGTSRSNFPEPSDHQSTYFENPKSQQPTPTQNILQSLIQSLSKSNN
APYYPPQQEERGFFQQPEPEPSFSNSFNAPPQSISVPTETAAKALGIPVI
NMPGLDFQRQQGVTMLMVKTPPNNFEEIDKKEAKKEKVEHKELTTDEGQR
LLGNKKDKQPQDEKKREEQEKNDFSLTLKKAADFVLGNAVSSGNISLTQR
AAIERKLTTLLEQKFKNKTQGEVKYALKRAKIPGACEDTIKDCFQFKEGG
VCPFMKTFMKASCRKTCNDCSIGGGAFDEVKVDDFIKKSKQHVKQDIITD
LPGALKSFQSTTVARTILHERKKKLNKIPEDPVMYLSFEKSNTKGVVVDQ
SKNNNNAQIMKGATISQHPLGTCGKVAEMNDGAIAWSGKTFTRKPKRAIS
ILMWIKVNKSGLINWFANGKTGTKKFYTKTEGAVVPPKVWTHVAGTFDGI
KGVARIYVNGDLEQEEQQAPIEKLESDWLENGIGSLFGDDSLRYVDEFYI
YDRALKSNEVRSLFNRCVFNRMIFHYGFQKGNNSIIYDQSGLENNAIMKS
GAKQKEDCGKCGYCLDLTQGPDPQLDIQRVPVRGLPTSKISITVWVMLNS
TRGVHNIFTTESDKGNIGYRLQVIDGGVRFAIGTDIESVPEIIDMWSQNK
ILVPEGLWTHLTATYNNENGVGKIFVNGILKLEKIASPDKREDLPTNWDN
EASVGDETFRGFLDEFVIYNWQLDENEVIYVRDYCADKPKLVRFTVRVPL
TKKTLVPHGATTGKAIKSVTNHTDKASWWDLYNELLQRRIKRSRNLIAKR
DMKTMHELEENPEKAAILLKKKK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 437..464 |
| None | No IPR available | PFAM | PF13385 | Laminin_G_3 | coord: 1005..1111
e-value: 5.9E-13
score: 49.1
coord: 1180..1328
e-value: 2.1E-15
score: 57.1 |
| None | No IPR available | GENE3D | 2.60.120.200 | | coord: 1121..1331
e-value: 1.7E-21
score: 76.9 |
| None | No IPR available | GENE3D | 2.60.120.200 | | coord: 913..1120
e-value: 9.9E-20
score: 70.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 422..475 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 647..684 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 79..210 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 726..772 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 585..635 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 488..550 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 360..398 |
| IPR003582 | ShKT domain | SMART | SM00254 | ShkT_1 | coord: 835..871
e-value: 0.0032
score: 26.7 |
| IPR003582 | ShKT domain | PFAM | PF01549 | ShK | coord: 836..870
e-value: 2.3E-4
score: 21.5 |
| IPR003582 | ShKT domain | PROSITE | PS51670 | SHKT | coord: 836..870
score: 8.582 |
| IPR013320 | Concanavalin A-like lectin/glucanase domain | SUPERFAMILY | 49899 | Concanavalin A-like lectins/glucanases | coord: 927..1117 |
| IPR013320 | Concanavalin A-like lectin/glucanase domain | SUPERFAMILY | 49899 | Concanavalin A-like lectins/glucanases | coord: 1119..1330 |
Blast
The following BLAST results are available for this feature:
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