TCONS_00048355-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048355-protein
Unique NameTCONS_00048355-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2262

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048355-protein ID=TCONS_00048355-protein|Name=TCONS_00048355-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2262bp
MSSTLHLPLMSPAKLPPAANNVDDPNDPNDEMEEGEVEDDGDGQSARSRG
MIHTKRIQRMSPERSRDKNRRSTSRDRSRRSISYDRTRRSRSRDRGRRST
SRDRNRKNRRRSRSRRRRYSHSRSRTRSRSRGRYRSRSRSKGRYHSRSRS
RSRGRYRSRSRSRGRRRSYSRSRSRSRGRDRSRERRRSRERDKDRGRRKS
SPSSKRDRSKESKRKSSREETPSISQPLLSPNKSENKNEQKFDIGKLLPS
KTELSESLPAQPYFIEDLRDLTVKKTIDRGLKSVSSERDEDEKKSMINFL
DKLTDQALTIKGQSAPNLSRQNSTSKDSIRDSCDETTRKRSISTSSAGSH
VHDGTTPKTELTTPSLPTPFNTYDQKKAEIELNAQKLLQLQLLQYQQSNT
MLAQNINTLSFLNQHQLLQQPVATSLISPSGSLLNKSISSTPSTPLVSSP
IVIPESFDFPSTTSVKQEAEIKTVIDKEEGKEEETTINHEAASSKPQEKP
PNNDIEKSTDNNLEQPTNEQLPSANDKPVRTKYHGFLRKLERSTMNSTEL
KAKLKKYNKKLVPEEIERLQKLINRREEKETKRKQIENKRKRTDSESSKK
DKLIDLPTPLKLKHSNDAHKKIESPSSSILSPPAVLSPTGSDPRLTSPKT
TFSSSKLADIYKPHILSPSASDSPPPPPPPPLPKPSEPTKRLPPSPLVSP
SIKELKVDGRKLSLSDYHKRKPKGSDSMENEYLAFLQSIGDEPEQEVMTS
PTTPQSTNQKLAPKPPLTTDGIAHWSAPKSSPTISKKTPPLPSPKVTNLP
LNQPPKPSTSQAPKPTTTEVPIKKSPLTPTALSLQQTPNQSNILPKKPST
PQSTKQSPAPPSHTPTIKPKSILVTHESIKNFDNKKIEFPPTTKPSPSIS
PTKKPPPPESPSKTAKSILALLGPPLRDSKKNLSAPKSPVDKTERKGFLC
GECGRSFAGFVDLEIHVNSKHKNVETINKELNPRNSIKAHHKPHQVKKPL
PAVGVTFTKIKPTENPDNVRIHTSKKTTKPSVKNITKGNDSSKKSNKPTK
KLSDTDIKQELAKIRELREKQTNHTSETKKERQRKPSTSEKDSTDNKRLK
MLSKEEIKDRERRIEQKRLKKKRRKEKERALKLKEQMEAKMKERPQQTDE
EQKSTDDTREDQTTDSKIETEISSQSPQNESGIVIGKRQSKQTQRKKAFM
DALKARQSRRKQMQDFVKEDNADNPSPSVSIIQTSVVPKVKSTKSSGMIK
AKEVVMKSKKMKRELKLEQLKNQSKTDVPTTQEIVTPSEVTVQPKEKRIN
LHQQVESVFKASGNKKQATPTPSPPTESATGEKNKDDAKTSNEIEGVSFE
NTTLSEEALMRIFDRVQSLKKKKESAHDNVTTEPPSAKTTPSSRKPSISD
DEDPTVRALKKKIGKAERAVRVLMRNQRKDDQKDDKTIKSTNSRSRRNST
DNPTVQVERVEPLKVKLHIKMADFHSETTAVMAPSSENEQQQQPQRQPQR
NGEIDVDVVNVVDVERNDYVETQEDQTKGKRKRNNKRRKGGYGSRKRSAR
NASNAAKEARTNSPQQASNSQTSRRKRSKYYVYEDELYAQQMKPIYEDST
LLGDLDQYNVGKDSPQQHSESDVGFTMLSKDVEFDSSFDYQSKIDQQAYL
TAEDIFSSLLSLADDCLTTEALQQIEDEKERRIQVDVKDTINEILNEVCP
ITDEEIVHDVLHKLVEDVSKDCVAIKRPYIKEEWEIDLSSKLHPALTNRQ
DEAATQQKESDAKLTQTNLRLSRNDNLAPLATEKLNQTQDLYMTFEEAQS
SEESISNAVSFDHKDNIIAKDVEQTLSSILLTIETKLNNEEWLSKSEQDH
TNKICVHPDAENTGEKELVFPKTLITKAELAIPVNKLKEVCQKPPNILVG
LDEQLELVITQKPSPSKHTNIAVKESDTENCHGKRALEMVDEETTCEPGL
KIQRQDEESASIDLSSPKVTLDSSSKIEISNEIKKPIDQQPGRNDDQRTK
GIDEQDLERESRMERRNRVSIMKNALYISTLCMKEEPIDEFTEVDVQVYG
TDDEKEVTESFTTDVRSLNNKMTNLKTLDLRAGFGDVDKPLKMYSCHRNV
HEEFVRSDEMRDIQEERESKSELVDSNLPVSHEELSKISKEIIKESLLKT
PTKVDPVHQSDDEKSPTFFKCRDCTLYFKSRESYHFHMKSTHGVKTNGVT
TGKYICKLCQIVLSTKKQLLRHVTFKHGRSKVSGDKCSICGLNFLKRAYL
KSHMRKSHGVKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030767XLOC_030767Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048355TCONS_00048355Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 569..596
NoneNo IPR availableCOILSCoilCoilcoord: 1406..1426
NoneNo IPR availableCOILSCoilCoilcoord: 1116..1144
NoneNo IPR availableCOILSCoilCoilcoord: 540..560
NoneNo IPR availableCOILSCoilCoilcoord: 1057..1077
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 680..696
score: 50.59
coord: 747..768
score: 30.0
coord: 666..678
score: 38.46
coord: 803..820
score: 33.33
coord: 844..869
score: 35.38
NoneNo IPR availableGENE3D3.30.160.60coord: 2163..2215
e-value: 0.0065
score: 16.1
NoneNo IPR availableGENE3D3.30.160.60coord: 870..956
e-value: 0.28
score: 11.0
NoneNo IPR availableGENE3D2.20.28.10coord: 957..1027
e-value: 0.44
score: 10.4
NoneNo IPR availableGENE3D3.30.160.60coord: 2216..2262
e-value: 5.9E-6
score: 26.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1749..1769
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1481..1578
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..945
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1942..2013
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 982..1255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1268..1461
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 2204..2227
e-value: 0.023
score: 23.9
coord: 948..971
e-value: 0.29
score: 20.2
coord: 2169..2192
e-value: 0.54
score: 19.3
coord: 2235..2258
e-value: 4.7
score: 16.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 950..971
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 2171..2192
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 2206..2227
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 2237..2258
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 2235..2262
score: 10.658
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 948..976
score: 10.014
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 2169..2192
score: 8.704
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 2204..2255

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048355-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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