TCONS_00048369-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00048369-protein
Unique Name	TCONS_00048369-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	607

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00048369-protein ID=TCONS_00048369-protein|Name=TCONS_00048369-protein|organism=Clytia hemisphaerica|type=polypeptide|length=607bp
EMDQHGEVEMQTLKNEEKLPENEKKESYQSIPEITRSVVRTRLSPINDIL
NLAETRINEFFQAHKALCVLTLGIVFLVGFLVYFCFAVTMNAERAKDLIY
VTVFGFFCLCYWLIKKXYVTVFGFFCLFYWLIKKFFGRVIWNRCFKPIAV
ALDSHQRLLNWIGCLALVGFLIFWICWDTRKDPGRLISLAGLLVYILIGF
LFSKQRDRIKWRPVITGFALQFFFGLLILRTEIGFNVFKWLGDRINILLS
FSGPGTELIFGKSDVFAFAVLPIITYFSSLTYVLYYLGFMQVIINKLAWI
LQITMGATATESVNTAGNIFLGQTESLLLIRPFIPKMTKSELHALMTGGL
ATIAGSLMALYIIFGVSASHLLSASVMSAPAALAMSKLMYPETEEPEFVG
EVKTEATEERNIFEAIAVGASLSIPIIVNVVVMMIAFVSIVSLFNGLLSW
LGSMVDCPQLSFEFLCSYLFMPFAYLMGVEYQDSFHVGEMLGTKTFLTEF
IAYKQLSAMIKNRKFQIAGGLQLSVRSEVISTYALCGFSNFGSMGVIMGV
LTGIAPEKRTIFSQLVFRALVAATLACFMTASIAGLLYKDLDVTPTPGPT
NVTRIMP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030774	XLOC_030774	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00048369	TCONS_00048369	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018270	C_nuclsd_transpt_met_bac
IPR002668	CNT_N_dom
IPR011657	CNT_C_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005337	nucleoside transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:1901642	nucleoside transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901642	nucleoside transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005337	nucleoside transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018270	Concentrative nucleoside transporter, metazoan/bacterial	TIGRFAM	TIGR00804	TIGR00804	coord: 186..587 e-value: 1.7E-138 score: 460.0
IPR002668	Concentrative nucleoside transporter N-terminal domain	PFAM	PF01773	Nucleos_tra2_N	coord: 191..262 e-value: 4.6E-23 score: 81.5
IPR011657	Concentrative nucleoside transporter C-terminal domain	PFAM	PF07662	Nucleos_tra2_C	coord: 370..587 e-value: 1.0E-71 score: 241.1

Blast

[Close]

BLAST of TCONS_00048369-protein vs. Swiss-Prot (Human)
Match: S28A3 (Solute carrier family 28 member 3 OS=Homo sapiens GN=SLC28A3 PE=1 SV=1)

HSP 1 Score: 442.195 bits (1136), Expect = 1.578e-147
Identity = 259/618 (41.91%), Postives = 374/618 (60.52%), Query Frame = 0

Query:    6 GEVEMQTLKNEEKLPENEKKESYQSIPEITRSVVRTRLSPINDILNLA---ETRINE---FFQAHKALCVLTLGIVFLVGFLVYFCFAVTMNAERAKDLIYVTVFGFFCLCYWLIKKXYVTVFGFFCLFYWLIKKFFGRVIWNRCFKPIAVALDSHQRLLNWIGCLALVGFLIFWICWDTRK-DPGRLISLAGLLVYILIGFLFSKQRDRIKWRPVITGFALQFFFGLLILRTEIGFNVFKWLGDRINILLSFSGPGTELIFG---KSDVFAFAVLPIITYFSSLTYVLYYLGFMQVIINKLAWILQITMGATATESVNTAGNIFLGQTESLLLIRPFIPKMTKSELHALMTGGLATIAGSLMALYIIFGVSASHLLSASVMSAPAALAMSKLMYPETEEPEFV--GEVKTEATEERNIFEAIAVGASLSIPIIVNVVVMMIAFVSIVSLFNGLLSWLGSMVDCPQLSFEFLCSYLFMPFAYLMGVEYQDSFHVGEMLGTKTFLTEFIAYKQLSAMIKNRKF---QIAGGLQ--LSVRSEVISTYALCGFSNFGSMGVIMGVLTGIAPEKRTIFSQLVFRALVAATLACFMTASIAGLLYKDLDVTPTPGPTNVTRIM 606
            G   +++   + +   N K++  Q   E      R  +   ++ +      E R +    F + HK      +  + L G+LV    A  +N  RA  L  +TV   F                 F ++  L+ K+  R+  +    P    L+SH   L W+   +LV  +IFW+ +DT K    +L+S  GL++YI++ FLFSK   R+ WRPV+ G  LQF  GLLILRT+ GF  F WLG ++   L ++  G   +FG   K   FAF VLPI+ +FS++  +LYYLG MQ II K+ WI+ +T G++  ESV  +GNIF+GQTES LL+RP++P +TKSELHA+MT G +TIAGS++  YI FGV +SHLL+ASVMSAPA+LA +KL +PETE+P+      +K E+ +  N+ EA   GAS SI ++ N+ V +IAF++++S  N  LSW G+M D PQLSFE +CSY+FMPF+++MGVE+QDSF V  ++G KTF  EF+AY+ LS  I  RK    +   G+Q  +S+RSE+I+TYALCGF+N GS+G+++G LT +AP ++   +    RAL+A T+ACFMTA IAG+L      + TP   N   ++
Sbjct:   33 GNNSIRSRAVQSREHTNTKQDEEQVTVEQDSPRNREHMEDDDEEMQQKGCLERRYDTVCGFCRKHKTTLRHIIWGILLAGYLVMVISACVLNFHRALPLFVITVAAIF-----------------FVVWDHLMAKYEHRI--DEMLSPGRRLLNSHWFWLKWVIWSSLVLAVIFWLAFDTAKLGQQQLVSFGGLIMYIVLLFLFSKYPTRVYWRPVLWGIGLQFLLGLLILRTDPGFIAFDWLGRQVQTFLEYTDAGASFVFGEKYKDHFFAFKVLPIVVFFSTVMSMLYYLGLMQWIIRKVGWIMLVTTGSSPIESVVASGNIFVGQTESPLLVRPYLPYITKSELHAIMTAGFSTIAGSVLGAYISFGVPSSHLLTASVMSAPASLAAAKLFWPETEKPKITLKNAMKMESGDSGNLLEAATQGASSSISLVANIAVNLIAFLALLSFMNSALSWFGNMFDYPQLSFELICSYIFMPFSFMMGVEWQDSFMVARLIGYKTFFNEFVAYEHLSKWIHLRKEGGPKFVNGVQQYISIRSEIIATYALCGFANIGSLGIVIGGLTSMAPSRKRDIASGAVRALIAGTVACFMTACIAGIL------SSTPVDINCHHVL 625

The following BLAST results are available for this feature:

BLAST of TCONS_00048369-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00048369-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S28A3	1.578e-147	41.91	Solute carrier family 28 member 3 OS=Homo sapiens ...	[more]

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TCONS_00048369-protein (polypeptide) - C. hemisphaerica