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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00048402-protein ID=TCONS_00048402-protein|Name=TCONS_00048402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=616bp
MASFEKAYLVLFLLSLVISSVHLYAIDEVISEDAGEEELVKQSRDDSVFD
QIANHNRAVSKGDEKTWLFEADIALVDKPEDEDDNQNAINSKMVRKRGLR
RSQEYLWIDRVVPYEYTNEISVSGQSAIDKAMQEISTKSCISFVKRTTEN
NWVKFVNRGACFSSVGRSFWRSGSQEISLAPSCLTSHGTIMHEILHSLGF
WHEQSRPDRNQFVEIMWENIAEGEEHNFAKYTRGESDDLNSQYDLSSIMH
YGRFSFSKNGQPTVLAISDPNKRLGQREKLSEEDVIQLNALYRCKDVGKT
YSTWSEWSPCSDQCVKTRQRFCPNHNKASCPDASRFGVHTEHGVCTQAEC
NKKRDGHWGRWSSWGECSYKCGQGTQQRTRKCDDPAPKNGGAQCPGEATQ
STGCFLKPCGLGANDCLFDGQGMCFWKDASSSTNYMWKRHKGKTPSGRTG
PNCDHSTGQSTRDGHYMYTESSSPARTGNKASLISNKIFSATLGRCVTFF
YSMHGLGCGAMRLFVVDVGSGVEHKVWEKTGPQGSAWKEAEVDVPYNTDY
KIRFESERGPSFQGDLGLDDIFIAEAKCSEKHNLGPKEKPTTTPVTTTTT
TTTTTTTTTRAPTTTM Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004222 | metalloendopeptidase activity |
| GO:0008237 | metallopeptidase activity |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0004222 |
metalloendopeptidase activity |
| molecular_function |
GO:0008237 |
metallopeptidase activity |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001506 | Peptidase M12A | PRINTS | PR00480 | ASTACIN | coord: 128..146
score: 32.19
coord: 203..220
score: 50.0
coord: 184..202
score: 46.49
coord: 242..257
score: 54.48
coord: 280..293
score: 39.29 |
| IPR001506 | Peptidase M12A | PFAM | PF01400 | Astacin | coord: 106..295
e-value: 2.5E-60
score: 203.3 |
| None | No IPR available | PRINTS | PR01705 | TSP1REPEAT | coord: 374..385
score: 44.05
coord: 393..404
score: 31.62
coord: 356..369
score: 46.68 |
| None | No IPR available | GENE3D | 2.60.120.200 | | coord: 412..580
e-value: 2.5E-41
score: 140.9 |
| None | No IPR available | GENE3D | 2.30.90.10 | | coord: 300..350
e-value: 3.1E-5
score: 24.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 439..477 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 582..616 |
| None | No IPR available | SUPERFAMILY | 55486 | Metalloproteases ("zincins"), catalytic domain | coord: 103..294 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | SMART | SM00209 | TSP1_2 | coord: 301..351
e-value: 3.7E-6
score: 36.5
coord: 358..410
e-value: 2.9E-11
score: 53.4 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | GENE3D | 2.20.100.10 | | coord: 354..409
e-value: 9.4E-17
score: 60.6 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | PFAM | PF00090 | TSP_1 | coord: 360..409
e-value: 1.9E-9
score: 37.5
coord: 302..350
e-value: 0.024
score: 14.7 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | PROSITE | PS50092 | TSP1 | coord: 298..351
score: 9.197 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | PROSITE | PS50092 | TSP1 | coord: 355..410
score: 13.301 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | SUPERFAMILY | 82895 | TSP-1 type 1 repeat | coord: 354..409 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | SUPERFAMILY | 82895 | TSP-1 type 1 repeat | coord: 299..345 |
| IPR000998 | MAM domain | SMART | SM00137 | MAM_2 | coord: 411..580
e-value: 5.5E-30
score: 115.6 |
| IPR000998 | MAM domain | PFAM | PF00629 | MAM | coord: 416..579
e-value: 6.6E-36
score: 123.5 |
| IPR000998 | MAM domain | PROSITE | PS00740 | MAM_1 | coord: 464..505 |
| IPR000998 | MAM domain | PROSITE | PS50060 | MAM_2 | coord: 414..580
score: 32.191 |
| IPR000998 | MAM domain | CDD | cd06263 | MAM | coord: 416..578
e-value: 6.86797E-37
score: 133.657 |
| IPR006026 | Peptidase, metallopeptidase | SMART | SM00235 | col_5 | coord: 103..247
e-value: 1.3E-40
score: 150.9 |
| IPR024079 | Metallopeptidase, catalytic domain | GENE3D | 3.40.390.10 | | coord: 99..296
e-value: 1.6E-56
score: 191.0 |
| IPR034035 | Astacin-like metallopeptidase domain | CDD | cd04280 | ZnMc_astacin_like | coord: 109..292
e-value: 9.30238E-81
score: 253.648 |
| IPR013320 | Concanavalin A-like lectin/glucanase domain | SUPERFAMILY | 49899 | Concanavalin A-like lectins/glucanases | coord: 415..578 |
Blast
BLAST of TCONS_00048402-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3) HSP 1 Score: 153.295 bits (386), Expect = 2.740e-39 Identity = 85/228 (37.28%), Postives = 121/228 (53.07%), Query Frame = 0
Query: 68 LFEADIALVDKPEDEDDNQNAINSKMVRKRGLRRSQEYLWIDRVVPYEYTNEISVSGQSAIDKAMQEISTKSCISFVKRTTENNWVKFVNRGACFSSVGRSFWRSGSQEISLAPSCLTSHGTIMHEILHSLGFWHEQSRPDRNQFVEIMWENIAEGEEHNFAKYTRGESDDLNSQYDLSSIMHYGRFSFSKNGQPTVLA-ISDPNKRLGQREKLSEEDVIQLNALYRC 294
LFE DI L D +N+I ++Y W +PY + + ++ + I A + K+CI F E N++ C+SSVG R G QE+S+ +C T+ HE LH+LGFWHEQSR DR+ +V IMW+ I G EHNF Y+ SD LN YD +S+MHY + +F +PT++ ISD +GQR S+ D+++LN LY C
Sbjct: 48 LFEGDIRL-----DRAQIRNSI-----------IGEKYRW-PHTIPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNR--RVGKQELSIGANC-DRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNC 255
The following BLAST results are available for this feature:
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