TCONS_00048513-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048513-protein
Unique NameTCONS_00048513-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length297

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048513-protein ID=TCONS_00048513-protein|Name=TCONS_00048513-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
MLMDWFVSFLNLFTKFGPATRSLSKFLLHSITGKCELERICDSGKYDFRQ
CQEIEYALYHSKNENIRKILVSDAMKVKEAMQTILRFKRIIPEEGIAFLN
TMPKFLRKIVSYNKLFGDVEELKLTKYDEENTSHEEMLYRLWTLLKEGDD
LKERHTKRWTEIGFQGKNPATDFRGMGILSLKNMLYLLENKKDVGMKIYG
LSNHPNYGFFFAIVAINFTGTAYDFMKNGKLKGYAYNLAAEEYTLEDFQE
FFCEMFLEFAEYWVMREPPNIMSFNAIRDDYLKEVHKRLDTGNWSID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030854XLOC_030854Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048513TCONS_00048513Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006816ELMO_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006816ELMO domainPFAMPF04727ELMO_CED12coord: 119..277
e-value: 1.1E-38
score: 133.0
IPR006816ELMO domainPROSITEPS51335ELMOcoord: 133..289
score: 24.41

Blast
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BLAST of TCONS_00048513-protein vs. Swiss-Prot (Human)
Match: ELMD2 (ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.045e-62
Identity = 110/280 (39.29%), Postives = 161/280 (57.50%), Query Frame = 0 
Query:    6 FVSFLNLFTKFGPATRSLSKFLLHSITGKCELERICDSGKYDFRQCQEIEYALYHSKNENIRKILVSDAMKVKEAMQTILRFKRIIPEEGIAFLNTMPKFLRKIVSYNKLFGDVEELKLTKYDEENTSHEEMLYRLWTLLKEGDDLKERHTKRWTEIGFQGKNPATDFRGMGILSLKNMLYLLENKKDVGMKIYGLSNHPNYGFFFAIVAINFTGTAYDFMKNGKLKGYAYNLAAEEYTLEDFQEFFCEMFLEFAEYWVMREPPNIMSFNAIRDDYLKEV 285
            F+S    F  +G   R   K+LL  +TGKCEL+RI D+     ++   IE +L +SKN+ ++K       +V + +  I++ K I PE+  +F   M   L +I  Y +L+ DVE ++   YD +N  HEE+L +LW LL     L  R +K+W EIGFQG +P TDFRGMGIL L N++Y  EN      +I   SNHP  G+ +AIV IN T  AY  +K+  LK + YNL     T+E F +F+C +  EF ++W   EP +IM FN  R+ + +++
Sbjct:    2 FISLWEFF--YGHFFRFWMKWLLRQMTGKCELQRIFDT-YVGAQRTHRIENSLTYSKNKVLQKATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKI 278
The following BLAST results are available for this feature:
BLAST of TCONS_00048513-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ELMD23.045e-6239.29ELMO domain-containing protein 2 OS=Homo sapiens G... [more]
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