TCONS_00048567-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048567-protein
Unique NameTCONS_00048567-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1121

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048567-protein ID=TCONS_00048567-protein|Name=TCONS_00048567-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1121bp
ETSKRANSTAGHWQTSTNYQQTQMLHSSRTFSKRNMNEPKGVDGIDKTKP
HRGRGRGMARKTSQENNQPLSEEPPGPPSPAIVKTDDSPNTEKTRETKVR
RTKAGYEPYQVKKKLSTLSLLENKSSSPSRSGSVSSKDNKNRKSSDDSRE
RKNSNSRSQSGRDRGGNRNKNGHQNKSNHRHDSSSRKHSNDSNRKLQRTS
SSSEKEHTKPEEKTVIPEKPKLTKEQEEKLKQKTLGLSILECPCNISLTE
ECEDCLPTENNNCVKETLNIENDETGSVIDNKFLVASPRTLHKEKSVLED
SDNEDSSALGTSIDNIHNEALRDTDNSSTLTHEDVNSMFFTDTDGHSTVS
GASETLFSEGTFEGTGSRTSIITVSSSSDTGSNPRMNSFDGEKNERKHSD
SKTRPRQRNVLSSIQSILNENKTLDTKSRASTNSRIKESPQRGDNRKKND
NRKKRDRKDSTKRDSKTRTDSNSSDKQSGAGGGILNLPQDCQEQMQADQR
ELNQRQVHFAISEKQAAKESKDEAVAQKQRMVHIKIRELKGLLQKPFDQK
IHIIEVMTISEAIQQLYKELIVHFQEYSFKHDFETALWKSAYHNIITKFR
DIVDSTKNIEKDKLQEVGDLYWKFLQNGIQFLDELVVLLQEHSNFDLQEI
LDDPVKMHHCGKQVKLALRSCHLLLIYIGDLERYVTHLQQDNNYCQAQKC
YREAQMLAPKNGKSYNQLAVVAVTTKRKLDAVYYYCRSLSASNPILTARD
RLTSIFHEIKKKAHVFKQRYEQQSSSINKEEVILQERADKLNPNHLRDEI
WIFIHLHQMYKVMLTDNNELVYLTQXXXXXXXXGDLERYVTHLQQDNNYC
QAQKCYREAQMLAPKNGKSYNQLAVVAVTTKRKLDAVYYYCRSLSASNPI
LTARDRLTSIFHEIKKKAHVFKQRYEQQSINKEEVILQERADKLNPNHLR
DEIWIFIHLHQMYKVMLTDNNELVYLTQPPLKNHSSVTDTAVVKKKPLSR
TTSRQDKLSLSKINRGYTIYFLHIHCKLYTNIGLEEFTRVHQETLSYFKT
LLQYPKASSVKQENLLKYMAINIFSIHMLIEKQQGLQEVMANTALDFAIV
FAVDMFGVLCSHCSKLLSSNN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030878XLOC_030878Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048567TCONS_00048567Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019458EST1
IPR011990TPR-like_helical_dom
IPR018834DNA/RNA-bd_Est1-type
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019458Telomerase activating protein Est1PFAMPF10374EST1coord: 583..686
e-value: 1.1E-12
score: 48.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 837..937
e-value: 7.6E-6
score: 25.2
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 618..798
e-value: 1.9E-6
score: 27.0
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 540..764
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 1007..1084
coord: 791..919
IPR018834DNA/RNA-binding domain, Est1-typePFAMPF10373EST1_DNA_bindcoord: 852..1119
e-value: 1.6E-38
score: 132.7
coord: 697..810
e-value: 5.9E-27
score: 94.7

Blast
[Close]
BLAST of TCONS_00048567-protein vs. Swiss-Prot (Human)
Match: EST1A (Telomerase-binding protein EST1A OS=Homo sapiens GN=SMG6 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.252e-37
Identity = 99/290 (34.14%), Postives = 150/290 (51.72%), Query Frame = 0 
Query:  834 GDLERYVTHLQQDNNYCQAQKCYREAQMLAPKNGKSYNQLAVVAVTTKRKLDAVYYYCRSLSASNPILTARDRLTSIFHEIKKKA-HVFKQRYEQQSINKEEVILQERADKLNPNHLRD-----EIWIFIHLHQMYKVMLTDNNELVYLTQPPLKNHSSVTDTAVVKKKPLSRTTSRQDKLSLSKINRGYTIYFLHIHCKLYTNIGLEEFTRVHQETLSYFKTLLQYPKASSVKQENLLKYMAINIFSIHMLIEKQQGLQEVMANTALDFAIVFAVDMFGVLCSHCSKLL 1117
            GD+ RY        NY +A+  Y +AQ +APKNG+ YNQLA++AV T+RKLDAVYYY RSL+ASNPILTA++ L S+F E K+KA  + K+++E+  ++ ++     +  K    H+ D     EIWI                       P     S  T++        S   +    LS S +N+ + + FLH H KL+T IG+E F  V ++ L  F+ LLQ+   S +    +L+ M IN+F++H   + +    E   +   + A    + MF +L   C+ LL
Sbjct:  733 GDIARYREQASDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQ---WRKGKKSTFRHVGDDTTRLEIWI----------------------HPSHPRSSQGTESGKD-----SEQENGLGSLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQH-SPSPIGSTRMLQLMTINMFAVHN-SQLKDCFSEECRSVIQEQAAALGLAMFSLLVRRCTCLL 990

HSP 2 Score: 152.91 bits (385), Expect = 2.583e-37
Identity = 92/240 (38.33%), Postives = 139/240 (57.92%), Query Frame = 0 
Query:  565 QLYKELIVHFQEYSFKHDFETALWKSAYHNIITKFRDIVDSTKNIEKDKLQEVGDLYWKFLQNGIQFLDELVVLLQEHSNFDLQEILDD-PVKMHHCGKQVKLALRSCHLLLIYIGDLERYVTHLQQDNNYCQAQKCYREAQMLAPKNGKSYNQLAVVAVTTKRKLDAVYYYCRSLSASNPILTARDRLTSIFHEIKKKA-HVFKQRYEQQSSSINKEEVILQERADKLNPNHLRDEIWI 802
            QLY+  I+   E+S   + +  LWK+A++ +I KFR +V    N+E    +++ +   + L  G  F D L+  LQ    F L++ +D   ++     K VK AL S    +I  GD+ RY        NY +A+  Y +AQ +APKNG+ YNQLA++AV T+RKLDAVYYY RSL+ASNPILTA++ L S+F E K+KA  + K+++E+   S ++     +     +  +  R EIWI
Sbjct:  621 QLYERCILLDIEFSDNQNVDQILWKNAFYQVIEKFRQLVKDP-NVENP--EQIRNRLLELLDEGSDFFDSLLQKLQVTYKFKLEDYMDGLAIRSKPLRKTVKYALISAQRCMICQGDIARYREQASDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQWRKGKKSTFRHVGDDTTRLEIWI 857
The following BLAST results are available for this feature:
BLAST of TCONS_00048567-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EST1A2.252e-3734.14Telomerase-binding protein EST1A OS=Homo sapiens G... [more]
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