TCONS_00048638-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048638-protein
Unique NameTCONS_00048638-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length189

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048638-protein ID=TCONS_00048638-protein|Name=TCONS_00048638-protein|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
MVVSFFIQTLSNDSTFVPEVCFWEPIGFSCDIKTQDVAETSQKEKNGLSH
ISKRIQAEFLFRNQVAASHNNPKAVTGSESGVFRIKDNNYFSQSFTVVWH
AALGCAFVLVLKPEENKGLADTNLNTIVKYIATVLDLPELDPKQQIINNP
DKVACILNVLLPSGQLLALNHRALKVLQKELEKLLSDKM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030918XLOC_030918Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048638TCONS_00048638Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029392AP-5_subunit_s1
Vocabulary: Cellular Component
TermDefinition
GO:0030119AP-type membrane coat adaptor complex
Vocabulary: Biological Process
TermDefinition
GO:0000724double-strand break repair via homologous recombination
GO:0016197endosomal transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0016197 endosomal transport
cellular_component GO:0030119 AP-type membrane coat adaptor complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029392AP-5 complex subunit sigma-1PFAMPF15001AP-5_subunit_s1coord: 1..182
e-value: 2.6E-28
score: 99.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048638-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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