TCONS_00048688-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00048688-protein
Unique Name	TCONS_00048688-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	391

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00048688-protein ID=TCONS_00048688-protein|Name=TCONS_00048688-protein|organism=Clytia hemisphaerica|type=polypeptide|length=391bp
GIACSPMAMKMDIGYAVNMMKKLDAKLKLYEKEEELSEDEDEEEETKEET
NGHGENEEEKASGDEGVKKESEEGEASEESKPVPVKKEKKEKINIPDENP
ILMKLPRSAHEVHTMQLTDDDEEDNKEMPIFVDEQLAKNLDLVLLYLRVV
HCIDFYNANEYHYEDEMPMRCGIMHVRAQPLESANRKDVFEYYKANKQKL
DQIVVENKRITTEEAEKLGLKTEDKEVEAFIKANTQELAKDKWLCPLSGK
KFRGPEFVRKHIMMKHEESVEDVRKEVKYFNNYVYDLRRPCFPEARPRPS
GGEHGGYGGHQRTNTGPGGGGWQRPQNMGTPKNNYQQSNFSTPQMQNVQQ
ETYGRVNTYPPKGMNRRGGGFRDRKVIRYRDLDAPEESDFF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030934	XLOC_030934	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00048688	TCONS_00048688	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007042	Arsenite-R_2

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 20..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..109
IPR007042	Arsenite-resistance protein 2	PFAM	PF04959	ARS2	coord: 182..360 e-value: 4.5E-48 score: 164.1

Blast

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BLAST of TCONS_00048688-protein vs. Swiss-Prot (Human)
Match: SRRT (Serrate RNA effector molecule homolog OS=Homo sapiens GN=SRRT PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 9.224e-59
Identity = 120/276 (43.48%), Postives = 161/276 (58.33%), Query Frame = 0

Query:  133 DEQLAKNLDLVLLYLRVVHCIDFYNANEYHYEDEMPMRCGIMHVRA-QPLESANRKDVFEYYKANKQKLDQIVVENKRITTEEAEKLGLKTEDKEVEAFIKANTQELAKDKWLCPLSGKKFRGPEFVRKHIMMKHEESVEDVRKEVKYFNNYVYDLRRPCFPEARP-RPSG-------GEHGGYGGHQRTNTGPGGGGWQRPQNMGTPKNNYQQSNFSTPQMQNVQQETYGRVN--------TYPPKGMNRRGGGFRDRKVIRYRDLDAPEESDFF 391
            DE+L K LD +LLYLR+VH +D+YN  EY  EDEMP RCGI+HVR   P    +  +V E+ K  ++KL  ++   + ++ EEA+K+G K  ++EVE F+ +NTQEL KDKWLCPLSGKKF+GPEFVRKHI  KH E +E+V+KEV +FNN++ D +RP  PE +P +P G       G   G     +T  G    G  RP  +G      + +  +            GR N         YP K  NR   G   R ++ YRDLDAP++ DFF
Sbjct:  602 DEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRGQGGYPGKPRNRMVRG-DPRAIVEYRDLDAPDDVDFF 876

The following BLAST results are available for this feature:

BLAST of TCONS_00048688-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00048688-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SRRT	9.224e-59	43.48	Serrate RNA effector molecule homolog OS=Homo sapi...	[more]

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TCONS_00048688-protein (polypeptide) - C. hemisphaerica