TCONS_00048723-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048723-protein
Unique NameTCONS_00048723-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length377

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048723-protein ID=TCONS_00048723-protein|Name=TCONS_00048723-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MAKTMKGKRKKMTYAQSCQLRALVQYGKVKVPQILRNEGNRFPGFKGIPR
STMYRHSQIPLDGNEPFDKRKQNPGRTPLLNERDYRAVKRQIKILRTFEG
SFSSKRLQLSLPEIQQKASNSTFRRHLGKIGYGYRSTRRKGILKQKDLKS
RLDYAKRIKRLGLGLEFWKQGISFYLDAVGFIYKQNPLDQARAPTSREWR
RRDEGLTFGCTAKGQKEGSTQIKFMVAISFQQGVVLCEQYENRLCGRKFS
TMIRKKFPVAFMLSINPKSKRVLQDGCPVQNSRRAKRALEKLGAHLFCIP
ARSPDLNPIENFFHLVGKEIRKEAIDKQVTRETKEEFAMRVKNILLNYPK
DKIDKIILSMDKRIEAVIANHGQRTKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030968XLOC_030968Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048723TCONS_00048723Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002492Transposase_Tc1-like
IPR012337RNaseH-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO:0006313transposition, DNA-mediated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006313 transposition, DNA-mediated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13358DDE_3coord: 215..326
e-value: 3.0E-9
score: 36.7
IPR002492Transposase, Tc1-likePFAMPF01498HTH_Tnp_Tc3_2coord: 101..157
e-value: 2.5E-6
score: 27.5
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 209..350
e-value: 8.8E-4
score: 18.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048723-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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