TCONS_00048754-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048754-protein
Unique NameTCONS_00048754-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length340

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048754-protein ID=TCONS_00048754-protein|Name=TCONS_00048754-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
MMKSKSYKKKVKRIIEYSTDKTKWRSRKEEDVPIDVMDRPSVYHATVVIF
LEFFAWGLLTSPSITVLAETFPENTFLMNGIIQGIKGFLSFLSAPLIGAL
SDVWGRKSFLLLTVFFTCVPIPLLRFNPWWFFACLSISGTFSVTFSIVFA
YVADCTDKSDRSHAYGLVSATFAASLITSPALGAYLGTVYSDSVVVALAT
AIALLDMLFILVCVPESLPERLRPVSWGKSIPWEKADPFSSLRKVGNDPM
VLLLCITIFLSYLPEAGQYSCIFLYLQHTIGFNQQEVAIYIAVVGFLSVI
VQTLVLTLLIKTLGLKHTICLALTFQILQLIWYGLSTQFW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030989XLOC_030989Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048754TCONS_00048754Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001958Tet-R_TetA/multi-R_MdtG
IPR011701MFS
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001958Tetracycline resistance protein TetA/multidrug resistance protein MdtGPRINTSPR01035TCRTETAcoord: 287..307
score: 26.19
coord: 79..98
score: 26.0
coord: 135..156
score: 30.91
coord: 165..187
score: 38.7
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 47..334
e-value: 1.6E-24
score: 86.4
NoneNo IPR availableGENE3D1.20.1250.20coord: 19..226
e-value: 4.5E-24
score: 84.3
NoneNo IPR availableGENE3D1.20.1250.20coord: 236..340
e-value: 3.5E-9
score: 35.8
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 97..113
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 41..340
score: 9.761
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 45..340
e-value: 2.25297E-12
score: 65.0277
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 39..340

Blast
[Close]
BLAST of TCONS_00048754-protein vs. Swiss-Prot (Human)
Match: MF14A (Hippocampus abundant transcript 1 protein OS=Homo sapiens GN=MFSD14A PE=1 SV=2)

HSP 1 Score: 456.062 bits (1172), Expect = 8.260e-160
Identity = 222/332 (66.87%), Postives = 270/332 (81.33%), Query Frame = 0 
Query:    9 KKVKRIIEYSTDKTKWRSRKEEDVPIDVMDRPSVYHATVVIFLEFFAWGLLTSPSITVLAETFPENTFLMNGIIQGIKGFLSFLSAPLIGALSDVWGRKSFLLLTVFFTCVPIPLLRFNPWWFFACLSISGTFSVTFSIVFAYVADCTDKSDRSHAYGLVSATFAASLITSPALGAYLGTVYSDSVVVALATAIALLDMLFILVCVPESLPERLRPVSWGKSIPWEKADPFSSLRKVGNDPMVLLLCITIFLSYLPEAGQYSCIFLYLQHTIGFNQQEVAIYIAVVGFLSVIVQTLVLTLLIKTLGLKHTICLALTFQILQLIWYGLSTQFW 340
            KK KR    S    K    K+   P  +   PSVYHA +VIFLEFFAWGLLT+P++ VL ETFP++TFLMNG+IQG+KG LSFLSAPLIGALSDVWGRKSFLLLTVFFTC PIPL++ +PWW+FA +S+SG F+VTFS+VFAYVAD T + +RS AYGLVSATFAASL+TSPA+GAYLG VY DS+VV LATAIALLD+ FILV VPESLPE++RP SWG  I WE+ADPF+SL+KVG D +VLL+CIT+FLSYLPEAGQYS  FLYL+  + F+ + VA +IAV+G LS+I QT+VL+LL++++G K+TI L L FQILQL WYG  ++ W
Sbjct:    5 KKKKRAANRSIMLAKKIIIKDGGTPQGI-GSPSVYHAVIVIFLEFFAWGLLTAPTLVVLHETFPKHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKSFLLLTVFFTCAPIPLMKISPWWYFAVISVSGVFAVTFSVVFAYVADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFILVAVPESLPEKMRPASWGAPISWEQADPFASLKKVGQDSIVLLICITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQLAWYGFGSEPW 335
The following BLAST results are available for this feature:
BLAST of TCONS_00048754-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MF14A8.260e-16066.87Hippocampus abundant transcript 1 protein OS=Homo ... [more]
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