TCONS_00048921-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048921-protein
Unique NameTCONS_00048921-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length466

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048921-protein ID=TCONS_00048921-protein|Name=TCONS_00048921-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
MAATGLSRSLRSCLCFTGKNLARTNSRDYNALSSSLPALSAAHQRHNPTI
NQKRNLAVHEYIALDILRKAGITVPRGGVARTPDEASKIAKSLETHDFVV
KAQVLAGGRGKGTFDSGLKGGVKIVYSPEEVEDVSSKMLGNKLHTIQTGT
VGRPCNEVLIVERLYPRREYYFAITLDRAAKGPLLIASSQGGMSIEDVAR
ENPDAIIRQPVDIYKGLDRETAINFAERVGFPGSNKEAAADLFLKLYDVF
LQNDCTLLEINPFTELNDGGVLCMDAKLNFDDNSLYRHKEIAELKDWSQE
DPREVEATQHDLNYIGLDGSIGCLVNGAGLAMATMDIIKLHGGSPANFLD
VGGGATAEAVTSAFRLISSDHNVKAILVNIFGGIMKCDVIAEGIIEAAKT
LNLNIPLVVRLQGTNVEDAKALIANSGMRILPCDDLEDAAKMVVKLADIV
SLAHEASLNVSFKLPI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031076XLOC_031076Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048921TCONS_00048921Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013815ATP_grasp_subdomain_1
IPR005809Succ_CoA_synthase_bsu
IPR005811CoA_ligase
IPR013650ATP-grasp_succ-CoA_synth-type
IPR016102Succinyl-CoA_synth-like
IPR017866Succ-CoA_synthase_bsu_CS
IPR011761ATP-grasp
IPR034723Succ_CoA_betaA_euk
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005524 ATP binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.470.20coord: 158..301
e-value: 9.9E-55
score: 184.1
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 56..300
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 76..157
e-value: 9.2E-23
score: 79.8
IPR005809Succinate--CoA synthetase, beta subunitPIRSFPIRSF001554SucCS_betacoord: 56..449
e-value: 2.9E-148
score: 491.6
IPR005809Succinate--CoA synthetase, beta subunitTIGRFAMTIGR01016TIGR01016coord: 57..447
e-value: 1.0E-139
score: 463.7
IPR005809Succinate--CoA synthetase, beta subunitHAMAPMF_00558Succ_CoA_betacoord: 56..448
score: 40.227
IPR005811ATP-citrate lyase/succinyl-CoA ligasePFAMPF00549Ligase_CoAcoord: 324..444
e-value: 1.1E-26
score: 93.3
IPR013650ATP-grasp fold, succinyl-CoA synthetase-typePFAMPF08442ATP-grasp_2coord: 58..264
e-value: 1.3E-69
score: 233.7
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 302..447
e-value: 1.9E-44
score: 150.7
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 301..447
IPR017866Succinyl-CoA synthetase, beta subunit, conserved sitePROSITEPS01217SUCCINYL_COA_LIG_3coord: 319..343
IPR011761ATP-grasp foldPROSITEPS50975ATP_GRASPcoord: 64..289
score: 8.989
IPR034723Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrialHAMAPMF_03220Succ_CoA_betaA_eukcoord: 53..466
score: 56.612

Blast
[Close]
BLAST of TCONS_00048921-protein vs. Swiss-Prot (Human)
Match: SUCB1 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLA2 PE=1 SV=3)

HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0
Identity = 267/413 (64.65%), Postives = 350/413 (84.75%), Query Frame = 0 
Query:   54 RNLAVHEYIALDILRKAGITVPRGGVARTPDEASKIAKSLETHDFVVKAQVLAGGRGKGTFDSGLKGGVKIVYSPEEVEDVSSKMLGNKLHTIQTGTVGRPCNEVLIVERLYPRREYYFAITLDRAAKGPLLIASSQGGMSIEDVARENPDAIIRQPVDIYKGLDRETAINFAERVGFPGSNKEAAADLFLKLYDVFLQNDCTLLEINPFTELNDGGVLCMDAKLNFDDNSLYRHKEIAELKDWSQEDPREVEATQHDLNYIGLDGSIGCLVNGAGLAMATMDIIKLHGGSPANFLDVGGGATAEAVTSAFRLISSDHNVKAILVNIFGGIMKCDVIAEGIIEAAKTLNLNIPLVVRLQGTNVEDAKALIANSGMRILPCDDLEDAAKMVVKLADIVSLAHEASLNVSFKLPI 466
            RNL++HEY+++++L++AG++VP+G VA++PDEA  IAK L + D V+KAQVLAGGRGKGTF+SGLKGGVKIV+SPEE + VSS+M+G KL T QTG  GR CN+VL+ ER YPRREYYFAIT++R+ +GP+LI SS GG++IEDVA E+P+AII++P+DI +G+ +E A+  A+++GFP +  E+AA+  +KLY +FL+ D T++EINP  E +DG VLCMDAK+NFD NS YR K+I +L+DW+QED R+ +A + +LNYIGLDG+IGCLVNGAGLAMATMDIIKLHGG+PANFLDVGGGAT   VT AF+LI+SD  V AILVNIFGGIM+CDVIA+GI+ A K L + IP+VVRLQGT V+DAKALIA+SG++IL CDDL++AA+MVVKL++IV+LA +A ++V F+LPI
Sbjct:   51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLPI 463
The following BLAST results are available for this feature:
BLAST of TCONS_00048921-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SUCB10.000e+064.65Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
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