TCONS_00049002-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049002-protein
Unique NameTCONS_00049002-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length291

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049002-protein ID=TCONS_00049002-protein|Name=TCONS_00049002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MSYKYTVNNQFLTKEQRDFYEKNGFLVIRKLIPQNELDRYHKRFVDICHK
RVDDTGAMTIMKDVALKNRQDVDPERVINKIQDYQADPELSSYFRLPQIL
KYVECFTGRDCSAVHTMLINKPPDPGTKSSRHPLHQDLYYFPFRPTDRIV
CSWTAMQKVHRNNGCLVVLPGTHTGELLRHGYPEWSGGVNKMYHGILDYK
VDDKKLVYLEMEPGDTVFFHPILIHGSGTNRTNGFRKAISCHYSTSHSHY
IDVKGTIQEDLAKEVVNVAEKKFPSGEWDIQVLIILSFYLT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031126XLOC_031126Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049002TCONS_00049002Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.620coord: 1..255
e-value: 3.1E-47
score: 160.5
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 5..268
IPR008775Phytanoyl-CoA dioxygenasePFAMPF05721PhyHcoord: 20..238
e-value: 1.0E-43
score: 149.9

Blast
[Close]
BLAST of TCONS_00049002-protein vs. Swiss-Prot (Human)
Match: PAHX (Phytanoyl-CoA dioxygenase, peroxisomal OS=Homo sapiens GN=PHYH PE=1 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 2.822e-124
Identity = 165/271 (60.89%), Postives = 208/271 (76.75%), Query Frame = 0 
Query:    3 YKYTVNNQFLTKEQRDFYEKNGFLVIRKLIPQNELDRYHKRFVDICHKRVDDTGAMTIMKDVALKNRQDVDPERVINKIQDYQADPELSSYFRLPQILKYVECFTGRDCSAVHTMLINKPPDPGTKSSRHPLHQDLYYFPFRPTDRIVCSWTAMQKVHRNNGCLVVLPGTHTGELLRHGYPEWSGGVNKMYHGILDYKVDDKKLVYLEMEPGDTVFFHPILIHGSGTNRTNGFRKAISCHYSTSHSHYIDVKGTIQEDLAKEVVNVAEKKF 273
            ++YT++N  LT EQR FYE+NGFLVI+ L+P  ++ R+   F  IC K V   G +T+M+DV +   +    E++I K+QD+Q D EL  Y  LP+ILKYVECFTG +  A+HTMLINKPPD G K+SRHPLHQDL+YFPFRP+D IVC+WTAM+ + RNNGCLVVLPGTH G L  H YP+W GGVNKM+HGI DY+ ++K  V+L ME GDTVFFHP+LIHGSG N+T GFRKAISCH++++  HYIDVKGT QE++ KEVV +A K F
Sbjct:   44 FQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLG-LTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYE-ENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFF 312
The following BLAST results are available for this feature:
BLAST of TCONS_00049002-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PAHX2.822e-12460.89Phytanoyl-CoA dioxygenase, peroxisomal OS=Homo sap... [more]
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