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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00049917-protein ID=TCONS_00049917-protein|Name=TCONS_00049917-protein|organism=Clytia hemisphaerica|type=polypeptide|length=841bp
MAETATIKNFVDQSKIVHDDKDDKKKIEPGSPVFSRKLDSKRKKSSRKEK
NSTKTRKGMKTRLSGVITDTAFYGQDGGDGKLKDLAKNRIQTNKLEGFEE
NETESVELQKTSNTSACESVHHEKVEYDSNDENSKEKVEAIKQDLLCGLS
EVQHVKNGPRGTAEKLPSEPNNDREDTETGGDICENDLVIDFETSQNGVI
DLSGETSANEEDDVEVEVKEETSQKVEVIKDVHNFCIECGTKILSQDAKF
CHQCGTKIERGTPTLKSSKAVEGTCEVAQPIDLSKAIGESNFVNGEVSFK
PTIDKEKKSRKRDNKGKPAGFTAHVIQTLLDIPPDRSNEGFQNNDSNTSS
SDIDLTLQTTHKKFKLSDTEHHRLENKFLGNVLGTERPNVTNSRSATPSF
STFTNSMPYSANDQNSEIYVSEHYKSKANSLMESLAAERQKVTNFTNLQN
ISIPTGDSFMSEVYPPPETNSYSKHVTTVERQPSFESSTRAEPTAKTNFP
LDQSILFGAIPSNITNNEFSNSVLGNGTSFMELLGSDSGLDESIMNPTHP
HIHPVKPNTFMAEQCTDQDGNTPLHHFVRDKKEGMAIRELERVSQFYSIE
EQNKYLNYRNQSGFVVLHTAILDAQNYKIIQCILRHGADVYITDRNGNNI
ILQIIKNPDFDESHVLALIQIIFKELDELRIQALINDESTSFNADGYSII
HEVVRKNYFEVLKYLRQSAKLNLNAIDRKEKRTGMALACRQRSWRMVNLL
LDLKACVNIPTSSEWYPVHASLEDENEKMLDRFMDSGVDIYGYKSIKTSK
ELKNKCEVYMRRRRRNNPSKDRSTKKRRRCACQSKYSSVRV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 763..792
e-value: 1100.0
score: 4.6
coord: 569..598
e-value: 940.0
score: 5.2
coord: 695..725
e-value: 1.5
score: 17.9
coord: 730..759
e-value: 55.0
score: 12.6
coord: 612..642
e-value: 1.6
score: 17.8 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 612..645
score: 9.404 |
| IPR026870 | Zinc-ribbon domain | PFAM | PF13240 | zinc_ribbon_2 | coord: 235..258
e-value: 7.8E-6
score: 25.3 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 524..670
e-value: 2.7E-9
score: 36.3 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 677..817
e-value: 7.6E-15
score: 54.2 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 569..795
score: 17.714 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 569..795 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 96..134 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 156..180 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 333..352 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..60 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 607..751
e-value: 6.3136E-13
score: 65.8678 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 724..790
e-value: 2.59595E-4
score: 39.2891 |
Blast
The following BLAST results are available for this feature:
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