TCONS_00049927-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049927-protein
Unique NameTCONS_00049927-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length371

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049927-protein ID=TCONS_00049927-protein|Name=TCONS_00049927-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
MAAVQLFRRTILKNHNFKKAGNVLLNFPSKIVSNNVGAASQLSFERFYRG
SNRSKRLKEAREKKKLERDLENKYGIKSKPEFNFKTWMKENYMKEVDAFQ
SRIGIQFNDTKMLIGAFAHNSFRDEIGALVSLSNSEDTATADISARLQII
RHLPDITYDRLSLLGYEVATSIIKEELYNKYKNLTPSICQDVCLFLTSRE
VISSLAKNIGLEDFLLLSRELDNLNEEAEESVYVNTMEDLSIDTFFALLG
AIEKDLGQTETISFIKDFILPHLDHTDLTKYVEMEDPHGELMKIFSLQGI
STTVRARTIVETGVDSHFPVFQVGIFCRGKQIGEGTGHSTSIARENAFKS
TVFQCLENEVDFTRLRKSSSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031647XLOC_031647Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049927TCONS_00049927Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
molecular_function GO:0004525 ribonuclease III activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 285..352
e-value: 5.6E-4
score: 20.0
IPR000999Ribonuclease III domainGENE3D1.10.1520.10coord: 93..283
e-value: 3.7E-18
score: 65.0
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 96..257
score: 17.753
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 158..278
e-value: 2.61933E-9
score: 53.0003
IPR000999Ribonuclease III domainSUPERFAMILY69065RNase III domain-likecoord: 157..279
coord: 93..126

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049927-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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