TCONS_00049944-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049944-protein
Unique NameTCONS_00049944-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length932

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049944-protein ID=TCONS_00049944-protein|Name=TCONS_00049944-protein|organism=Clytia hemisphaerica|type=polypeptide|length=932bp
MFSSAIKKTQSTTPTKRSFTPTELKNYVDKVQSRLNSPMEKKSKAFAFAR
LYYDAKDYQTAKRYLNDYLSIQNRDFRVYNLLGAVEESLSNFQEAFNAYK
RSLELCSSQKDILIKVLQMCRKCTMDPLRAKVWADKGARTCPGHPDVFEL
KWHLLSMETPQRYDEIENLIADELTRHPRDPSLHKKLVTNYNARGSLKEA
FSHCRSVEKTGAFNDDIEWLECAVDVFDTYQQENGDNRILAYLSLASALC
KLMRVHLTKSPTRDCMNAFMRFDTTVLKLQELKTDDTFSGLMTEWKDCVN
EMQGQLYLNAGIFLIKLGKENFIPWMKANQMMYACMMASWLVPAPHLTPK
LFGRHSPLKRQNQQAYDWSILACSRLSQAGHMLLQLEDEYGEEWQQGTLA
DFCTEQGRKTILDFLYNGGDHSQSSFAANPKFLETEFALPEPQQLVQYDE
VSVADKAQDLHYITWIGLNWNQLNEPMRPGVGVIVGRLFEGIALDAKNMK
NCHHTAMCLRDVEAFIYGIIRSSKSIHLECIKHEDELKLLPTVICTSLVT
KSQQDWWQAAYSLYTGKIGTLSPARLKVVLQKGLETLRCIKDHGIDPRIL
IYMAQAFWEKAEQLQRLKEKEYDYQDHWQSLQDRAVFYMKEAIRILDIFK
RNKTIPICENPLIPPLSDPLLTDEVTNLLNKNYIKLGDAAMTDGKYQDAL
QYYEEVKTLPALYNQAQIYIKMASDTDPQTVEGEKDHLYYMTKAKEKLQI
CLLNAEHTPEFKQTIFEQMQELASRTPSKPAKPMPKPLAQKSLSFQANSE
DTEISEPQSIKDEETVLENNDMSSMLEKSILQEQLDAKENENRSLKQALA
MYEAQIEMQRQRPPLAQPFMAPPHHPAYRQQKQQFMQQYMNAQQQHAMGH
QMHPQMNQMMSPHYQQQMYGSPAMMGPQQHPG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031655XLOC_031655Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049944TCONS_00049944Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 828..862
NoneNo IPR availablePFAMPF13432TPR_16coord: 47..104
e-value: 2.6E-4
score: 21.5
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 680..713
e-value: 200.0
score: 3.6
coord: 76..109
e-value: 0.024
score: 23.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 680..713
score: 7.316
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 76..109
score: 8.791
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 42..75
score: 5.605
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 20..918
e-value: 3.6E-29
score: 101.2
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 48..256
coord: 683..730
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 42..109
score: 12.528
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 680..713
score: 7.61

Blast
[Close]
BLAST of TCONS_00049944-protein vs. Swiss-Prot (Human)
Match: RBP2 (E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 305.064 bits (780), Expect = 1.253e-86
Identity = 202/743 (27.19%), Postives = 365/743 (49.13%), Query Frame = 0 
Query:   23 ELKNYVDKVQSRLNSPMEKKSKAFAFARLYYDAKDYQTAKRYLNDYLSIQNRDFRVYNLLGAVEESLSNFQEAFNAYKRSLELCSSQKDILIKVLQMCRKCTMDPLRAKVWADKGARTCPGHPDVFELKWHLLSMETPQRYDEIENLIADELTRHPRDPSLHKKLVTNYNARGSLKEAFSHCRSVEKTGAFNDDIEWLECAVDVFDTY-------QQENGDNRILAYLSLASALCKLMRVHLTKSPTRDCMNAFMRFDTTVLKLQELKTDDTFSGLMTEWKDCVNEMQGQLYLNAGIFLIKLGKENF-IPWMKANQMMYACMMASWLVPAPHLTPKLFGRHSPLKRQNQQAYDWSILACSRLSQAGHMLLQLEDEYGEEWQQGTLADFCTEQGRKTILDFLYNGGDHSQSSFAANPKFLETEFALPEPQQLVQYDEVSVADKAQDLHYITWIGLNWNQLNEPMRPGVGVIVGRLFEGIALDAKNMKNCHHTAMCLRDVEAFIYGIIRSSKSIHLE----CIKHEDELK--LLPTVICTSLVTKSQQDWWQAAYSLYTGKIGTLSPARLKVVLQKGLETLRCIKDHGIDPRILIYMAQAFWEKAEQLQRLKEKEYDYQDHWQSLQDRAVFYMKEAIRILDIFKRNKTIPICENPLIPPL-SDPLLTDEVTNLLNKNYIKLGDAAMTDGKYQDALQYYEEVKTLPALYNQAQIYIKMASD--TDPQTVEGEKDHLYYMTKAKEKL 748
            +++ Y+  VQ    SP +K  K F FA+LYY+AK+Y  AK+Y+  Y+++Q RD + +  LG + E   N  +A   Y+RS+EL  +QKD+++K+ ++  K  +   RAK W ++ A+  PG P +++LK  LL  E    ++++ +LI  EL   P D  ++ +LV  Y +   LK+A +HC   E+  A    +EW  C V     Y       + +  D R      L  A   LM + L+    ++       FD+ +  ++ L  +D  S           EM+G  Y++AG  L+K+G+ +  + W   +++   C + ++ VP P +  KL      +K +  Q     ++AC RLSQ+GHMLL L     +++ +  +  F  + G+  + D L++      +SF  +      +   PE + L +YD  ++      L ++TW+GL WN L  P  PG+   + +LF  +  +   ++     ++C+ D+E F+ G++ +S   HL+    C  H    +   LP  +C  L T+ Q+ WW A  +L   K    + A+L++++Q  + TLR  + HG+ P +L++ A+   +    L       YD +++      R+V Y K+ + +L I K+  +IP   +PL     S  +   E+       +I        +G  +DA+  +E +K++ + +N A I+ + A D   D  + E +++   Y+ K ++ L
Sbjct:    7 DVERYIASVQGSTPSPRQKSMKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWLERAAKLFPGSPAIYKLKEQLLDCEGEDGWNKLFDLIQSELYVRPDDVHVNIRLVEVYRSTKRLKDAVAHCHEAERNIALRSSLEWNSCVVQTLKEYLESLQCLESDKSDWRA-TNTDLLLAYANLMLLTLSTRDVQESRELLQSFDSALQSVKSLGGNDELSATFL-------EMKGHFYMHAGSLLLKMGQHSSNVQWRALSELAALCYLIAFQVPRPKI--KL------IKGEAGQNL-LEMMACDRLSQSGHMLLNL-SRGKQDFLKEIVETFANKSGQSALYDALFSSQSPKDTSFLGSDDIGNIDVREPELEDLTRYDVGAIRAHNGSLQHLTWLGLQWNSL--PALPGIRKWLKQLFHHLPHETSRLETNAPESICILDLEVFLLGVVYTS---HLQLKEKCNSHHSSYQPLCLPLPVCKQLCTERQKSWWDAVCTLIHRKAVPGNVAKLRLLVQHEINTLRAQEKHGLQPALLVHWAECLQKTGSGLNSF----YDQREYI----GRSVHYWKKVLPLLKIIKKKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAILDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALSPEEQEECKNYLRKTRDYL 718
The following BLAST results are available for this feature:
BLAST of TCONS_00049944-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RBP21.253e-8627.19E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=R... [more]
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