TCONS_00049967-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049967-protein
Unique NameTCONS_00049967-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length814

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049967-protein ID=TCONS_00049967-protein|Name=TCONS_00049967-protein|organism=Clytia hemisphaerica|type=polypeptide|length=814bp
MAAESEALKLPKPIPVATELLNFTGDRRLDFLGFVRPDEVQDIKAYNVDK
DGNRYYLVHWKESWKAESSLIYCDKLIQRFWQESQKHVDFTSQTSQVNSQ
HSHPHDKKEQSPTTLYNSFQLSSISGTKESANEILNCLERDVVASELASK
NEKIEDGDKNYLNLTTSDSNRAFDSDPSITQNEVASHDEEDELIDTQVET
LPPSFTLIDKRTESSSSSHSQQDFGECTRDNGSVINDTKSLLKNNTLAIN
DVSDKEVNKPESECGENNSLHDTHEAISIEPSSVTEEQVEKTCEDDSPEP
VGESSVALTVDLDVSMTEGDSQSKKGASKRKNRLPKIHPPKIGDETDKAL
MSQKKKKKSGVVGPSPRKKLIEPKSRISASSTDDSVIPSDGISSTTKKQT
SSANLKCMVCDKSLTSLQNLMKHLLTHNNNHTCQICMKTFKNMHFLKHHM
DKHKTSYEYSCPICHKMFKFKNNMRCHLRKHTAEKKFECEICHKKFMGPY
NLREHMKTHSTDRPYECELCLKRYKDSGALNKHLMTHQEKKVSCEICNRS
FSNTTQLNRHMRFHLSWPGDSFKSKSKKKSTESFQCKDCDKSFKHYSNLS
AHIKKAHRELKNECTVCEKRFAFKYELKQHMFIHQEGVEKQSKFKCQYCN
KYFQRSTTLKTHEQNTHLGVKRFKCEVCGKEFGTKFNMQVHVEKIHNTNN
EQTDGKTRSKRRTRSSSTAATKPPAENITQLVPTDVNPLLVPPPSVPPFP
SQVTSLTSPLLRNMTANDMLRNAISSMPVSNLPDLNYFSALNATQSGRGY
QFYGLPPPDFGVSQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031664XLOC_031664Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049967TCONS_00049967Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR016197Chromodomain-like
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 487..509
e-value: 4.4E-4
score: 29.6
coord: 431..453
e-value: 0.96
score: 18.5
coord: 673..696
e-value: 4.9E-4
score: 29.4
coord: 584..607
e-value: 0.0026
score: 27.0
coord: 644..667
e-value: 0.014
score: 24.6
coord: 405..427
e-value: 0.015
score: 24.5
coord: 515..537
e-value: 0.0048
score: 26.1
coord: 459..481
e-value: 0.12
score: 21.5
coord: 612..634
e-value: 0.091
score: 21.9
coord: 542..564
e-value: 8.8E-4
score: 28.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 646..667
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 461..481
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 614..634
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 544..564
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 489..509
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 675..696
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 517..537
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 407..427
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 586..607
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 433..453
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 459..486
score: 12.715
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 673..701
score: 11.323
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 431..458
score: 9.141
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 542..564
score: 11.365
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 515..542
score: 10.824
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 487..514
score: 13.755
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 405..432
score: 9.494
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 584..612
score: 12.258
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 644..672
score: 12.715
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 612..634
score: 9.328
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 467..523
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 583..634
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 513..564
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 621..682
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 403..440
NoneNo IPR availableGENE3D3.30.160.60coord: 416..440
e-value: 1.8E-8
score: 33.9
coord: 497..526
e-value: 2.5E-15
score: 55.8
coord: 81..415
e-value: 0.0011
score: 18.6
NoneNo IPR availableGENE3D2.20.28.30coord: 596..621
e-value: 1.3E-11
score: 44.2
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 487..509
e-value: 2.2E-4
score: 21.4
coord: 515..537
e-value: 0.0053
score: 17.0
coord: 543..564
e-value: 8.8E-5
score: 22.7
coord: 584..607
e-value: 3.2E-6
score: 27.2
coord: 613..634
e-value: 0.0056
score: 17.0
coord: 673..696
e-value: 0.0024
score: 18.2
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 406..427
e-value: 6.8E-4
score: 19.4
NoneNo IPR availableGENE3D3.30.160.60coord: 682..710
e-value: 8.2E-5
score: 22.2
NoneNo IPR availableGENE3D2.40.50.40coord: 36..80
e-value: 5.8E-5
score: 22.4
NoneNo IPR availableGENE3D3.30.160.60coord: 441..471
e-value: 1.5E-8
score: 34.2
NoneNo IPR availableGENE3D3.30.160.60coord: 656..681
e-value: 5.3E-12
score: 45.4
coord: 472..496
e-value: 2.1E-12
score: 46.7
coord: 527..550
e-value: 1.7E-12
score: 47.0
NoneNo IPR availableGENE3D2.20.28.10coord: 622..655
e-value: 1.6E-7
score: 31.0
coord: 551..595
e-value: 6.1E-10
score: 38.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 694..731
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..231
NoneNo IPR availableCDDcd00024CHROMOcoord: 39..83
e-value: 4.27162E-5
score: 41.0955
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 39..85

Blast
BLAST of TCONS_00049967-protein vs. Swiss-Prot (Human)
Match: ZN778 (Zinc finger protein 778 OS=Homo sapiens GN=ZNF778 PE=1 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 1.006e-39
Identity = 99/293 (33.79%), Postives = 144/293 (49.15%), Query Frame = 0
Query:  407 CMVCDKSLTSLQNLMKHLLTHNNN--HTCQICMKTFKNMHFLKHHMDKHKTSYEYSCPICHKMFKFKNNMRCHLRKHTAEKKFECEICHKKFMGPYNLREHMKTHSTDRPYECELCLKRYKDSGALNKHLMTH-QEKKVSCEICNRSFSNTTQLNRHMRFHLSWPGDSFKSKSKKKSTESFQCKDCDKSFKHYSNLSAHIKKAHRELKNECTVCEKRFAFKYELKQHMFIHQEGVEKQSKFKCQYCNKYFQRSTTLKTHEQNTHLGVKRFKCEVCGKEFGTKFNMQVHVEKIH 696
            C  C K+ T    L +H+ TH     +TC+ C K F     L  H+  H     Y C  C K F   +++  H R HT EK +EC+ C K F G   L +HM+TH+ ++PYEC+ C K Y     LN+H+ TH +EK   C +C +SF N++ LN+H++ H                 + ++CKDC K+F   S+L+ HI+    E   EC VC K F        H+ +H      +  + C+ C K F  S+ L  H + TH G K + C  CGK F    ++  H  +IH
Sbjct:  395 CSYCGKAFTVRCGLTRHVRTHTGEKPYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHARIHTGEKPYECKQCGKAFTGRSGLTKHMRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICTVCRKSFRNSSCLNKHIQIHT--------------GIKPYECKDCGKTFTVSSSLTEHIRTHTGEKPYECKVCGKAFT----TSSHLIVHIRTHTGEKPYICKECGKAFASSSHLIEHRR-THTGEKPYICNECGKAFRASSHLHKH-GRIH 667          

HSP 2 Score: 150.599 bits (379), Expect = 1.216e-37
Identity = 97/305 (31.80%), Postives = 150/305 (49.18%), Query Frame = 0
Query:  391 GISSTTKKQTSSANLKCMVCDKSLTSLQNLMKHLLTHNNN--HTCQICMKTFKNMHFLKHHMDKHKTSYEYSCPICHKMFKFKNNMRCHLRKHTAEKKFECEICHKKFMGPYNLREHMKTHSTDRPYECELCLKRYKDSGALNKHLMTH-QEKKVSCEICNRSFSNTTQLNRHMRFHLSWPGDSFKSKSKKKSTESFQCKDCDKSFKHYSNLSAHIKKAHRELKNECTVCEKRFAFKYELKQHMFIHQEGVEKQSKFKCQYCNKYFQRSTTLKTHEQNTHLGVKRFKCEVCGKEFGTKFNMQVHV 692
            G+S   +        +C  C K+      L +H  TH       C +C K F+N   L +H+  H     Y+C  C K F  +  +  H+R HT EK + C+ C K F     L EH++TH+ ++PYEC+ C K +  S +L +H   H  EK   C+ C ++F+  + L +HMR H                 + ++CKDC K++     L+ H+K    E    CTVC K F     L +H+ IH  G++    ++C+ C K F  S++L  H + TH G K ++C+VCGK F T  ++ VH+
Sbjct:  323 GLSKHVQTDPGQKPYECKDCGKACGGFYLLNEHGKTHTREKPFACVVCGKYFRNSSCLNNHVRIHTGIKPYTCSYCGKAFTVRCGLTRHVRTHTGEKPYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHARIHTGEKPYECKQCGKAFTGRSGLTKHMRTHT--------------GEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICTVCRKSFRNSSCLNKHIQIHT-GIK---PYECKDCGKTFTVSSSLTEHIR-THTGEKPYECKVCGKAFTTSSHLIVHI 608          

HSP 3 Score: 124.02 bits (310), Expect = 3.626e-29
Identity = 90/301 (29.90%), Postives = 136/301 (45.18%), Query Frame = 0
Query:  410 CDKSLTSLQNLMKHLLTH--NNNHTCQICMKTFKNMHFLKHHMDKHKTSYEYSCPICHKMFKFKNNMRCHLRKHTAEKKFECEICHKKFMGPYNLREHMKTHSTDRPYECELCLKRYKDSGALNKHLMTH-QEKKVSCEICNRSFSNTTQLNRHMRFH-------LSWPGDSFKSKSK-------KKSTESFQCKDCDKSFKHYSNLSAHIKKAHRELKNECTVCEKRFAFKYELKQHMFIHQEGVEKQSKFKCQYCNKYFQRSTTLKTHEQNTHLGVKRFKCEVCGKEFGTKFNMQVHVE 693
            C K+LT        +  H   N H C+ C K F+   +L   +  H          C K     +++  H+R H AEK  EC+ C K F G   L +H++T    +PYEC+ C K       LN+H  TH +EK  +C +C + F N++ LN H+R H        S+ G +F  +             + + CKDC K+F   S L+ H++    E   EC  C K F     L +H  IH      +  ++C+ C K F   + L  H   TH G K ++C+ CGK +   + +  HV+
Sbjct:  230 CGKALTHSMGCATPVEMHAVRNPHVCRECGKAFRYTAYLTGRVQVHPGEKPCELEECGKASPVSSSLTQHVRIHAAEKPCECKECGKAFTGLSGLSKHVQTDPGQKPYECKDCGKACGGFYLLNEHGKTHTREKPFACVVCGKYFRNSSCLNNHVRIHTGIKPYTCSYCGKAFTVRCGLTRHVRTHTGEKPYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHARIHT----GEKPYECKQCGKAFTGRSGLTKH-MRTHTGEKPYECKDCGKAYNRVYLLNEHVK 525          

HSP 4 Score: 115.931 bits (289), Expect = 1.387e-26
Identity = 75/267 (28.09%), Postives = 124/267 (46.44%), Query Frame = 0
Query:  385 SVIPSDGISSTTKKQTSSANLKCMVCDKSLTSLQNLMKHLLTHNNN--HTCQICMKTFKNMHFLKHHMDKHKTSYEYSCPICHKMFKFKNNMRCHLRKHTAEKKFECEICHKKFMGPYNLREHMKTHSTDRPYECELCLKRYKDSGALNKHLMTH-QEKKVSCEICNRSFSNTTQLNRHMRFHLSWP-------GDSFKSKSK-------KKSTESFQCKDCDKSFKHYSNLSAHIKKAHRELKNECTVCEKRFAFKYELKQHMFIH 634
            S   S  ++   +  T     +C  C K+ T    L KH+ TH     + C+ C K +  ++ L  H+  H     + C +C K F+  + +  H++ HT  K +EC+ C K F    +L EH++TH+ ++PYEC++C K +  S  L  H+ TH  EK   C+ C ++F++++ L  H R H           G +F++ S            + ++CK+C K++  +  L  H+K    E    C  C K F     L  H  IH
Sbjct:  457 SFTVSSSLTEHARIHTGEKPYECKQCGKAFTGRSGLTKHMRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICTVCRKSFRNSSCLNKHIQIHTGIKPYECKDCGKTFTVSSSLTEHIRTHTGEKPYECKVCGKAFTTSSHLIVHIRTHTGEKPYICKECGKAFASSSHLIEHRRTHTGEKPYICNECGKAFRASSHLHKHGRIHTGQKPYKCKECGKAYNRFYLLKEHLKTYTEEQVFVCKDCGKSFKNSSCLNHHTQIH 723          

HSP 5 Score: 85.1149 bits (209), Expect = 5.693e-17
Identity = 76/285 (26.67%), Postives = 119/285 (41.75%), Query Frame = 0
Query:  410 CDKSLTSLQNLM-KHLLTHNNNHTCQICMKTFKNMHFLKHHMDKHKTSYEYSCPICHKMFKFKNNMRCHLRKHTAEKKFECEICHKKFMGPYNLREHMKTHSTDRPYECELCLKRYKDSGALNKHLMTH-QEKKVSCEICNRSFSNTTQLNRHMRFHLSWPGDSFKSKSKKKSTESFQCKDCDKSFKHYSNLSAHIKKAHRELKNECTVCEKRFAFKYELKQHMFIHQEGVEKQSKFKCQYCNKYFQRSTTLKTHEQNTHLGVKRFKCEVCGKEFGTKFNMQVHV 692
            C K+ +S  N++ +   T + +     C + F N  +L+     H     +    C K           +  H       C  C K F     L   ++ H  ++P E E C K    S +L +H+  H  EK   C+ C ++F+  + L++H++   + PG            + ++CKDC K+   +  L+ H K   RE    C VC K F     L  H+ IH  G++    + C YC K F     L  H + TH G K + C+ CGK F T   +  HV
Sbjct:  175 CGKAFSSTPNVVSQQACTRDRSLDYSSCGEVFLNQSYLQARAGSHNGEETWKWKPCGKALTHSMGCATPVEMHAVRNPHVCRECGKAFRYTAYLTGRVQVHPGEKPCELEECGKASPVSSSLTQHVRIHAAEKPCECKECGKAFTGLSGLSKHVQ---TDPGQ-----------KPYECKDCGKACGGFYLLNEHGKTHTREKPFACVVCGKYFRNSSCLNNHVRIHT-GIK---PYTCSYCGKAFTVRCGLTRHVR-THTGEKPYTCKDCGKAFCTSSGLTEHV 440          

HSP 6 Score: 82.8037 bits (203), Expect = 3.163e-16
Identity = 47/155 (30.32%), Postives = 80/155 (51.61%), Query Frame = 0
Query:  389 SDGISSTTKKQTSSANLKCMVCDKSLTSLQNLMKHLLTHNNN--HTCQICMKTFKNMHFLKHHMDKHKTSYEYSCPICHKMFKFKNNMRCHLRKHTAEKKFECEICHKKFMGPYNLREHMKTHSTDRPYECELCLKRYKDSGALNKHLMTHQEKK 541
            S  ++   +  T     +C VC K+ T+  +L+ H+ TH     + C+ C K F +   L  H   H     Y C  C K F+  +++  H R HT +K ++C+ C K +   Y L+EH+KT++ ++ + C+ C K +K+S  LN H   H ++K
Sbjct:  573 SSSLTEHIRTHTGEKPYECKVCGKAFTTSSHLIVHIRTHTGEKPYICKECGKAFASSSHLIEHRRTHTGEKPYICNECGKAFRASSHLHKHGRIHTGQKPYKCKECGKAYNRFYLLKEHLKTYTEEQVFVCKDCGKSFKNSSCLNHHTQIHTDEK 727          
The following BLAST results are available for this feature:
BLAST of TCONS_00049967-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7781.006e-3933.79Zinc finger protein 778 OS=Homo sapiens GN=ZNF778 ... [more]
back to top