TCONS_00049992-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049992-protein
Unique NameTCONS_00049992-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length213

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049992-protein ID=TCONS_00049992-protein|Name=TCONS_00049992-protein|organism=Clytia hemisphaerica|type=polypeptide|length=213bp
FKRGKARQSQTFRCSAFFLCVLFLRSLFPSVTFENPPSSFIYQRLRIHSR
MADTEEQVPQTEEPTTEKVESTEEEKPETEEEEITEFIRDPILDEEEMKK
VFVGGISTESTEDELKQYFEEKCGGSVTDTVIIKKDTDKKSHFGFLTFET
SDLVDEVLLKREELNFKGRQLDVNRAVPKNNNNAGAHERTKKLFIANLPK
MNCSEDDLLXCTN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031673XLOC_031673Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049992TCONS_00049992Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 100..174
e-value: 2.5E-12
score: 57.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 101..171
e-value: 5.5E-10
score: 38.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 99..178
score: 14.675
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 96..208
NoneNo IPR availableGENE3D3.30.70.330coord: 5..192
e-value: 7.0E-17
score: 61.1

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049992-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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