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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00050069-protein ID=TCONS_00050069-protein|Name=TCONS_00050069-protein|organism=Clytia hemisphaerica|type=polypeptide|length=652bp
MARKEEGLQSELEKLCECVICCDRVTNPRTLPCDHSFCKDCLEELVMFKQ
RNIPFIACPNRCGEQCLPAGSNVHKMKASLYLKQLLDLLDKTIPVDSSFG
SESSCGIDNCTRPLRIYCKVCQQFYCQPCFKNNVSCKDKHEIKTVCFSKR
RNTIEPYCTKHECSAIYQCQTCSANYLCKYCKQYSHADHRVTEISFENVY
KPFKSHKNTLNRYNELFEDLNSVISCIWQNVEVTESNFSRFLERQKMEIT
LQFFDQLLAAEASIKKQYQSKVQHFIEDIFDRKQKFEDLIARNNRYRKIL
DELEHRTIAELLFNTRLNEVEAVVKENQATYKACSQIDEFKVYVSPNKEL
LLERPFGHVNFSKDILKDEEVVKKLQVLHPLSDWKKEKEEVHKEKNIHAM
KEKLKLLFAADFSTASPTLRSKEKRKPFPNEPTTSKESHASLNSTKNPLS
DNQGHSSPQRSKTPKNKIKIPSPTHTVSDEQPVPHSPPDLPERSPIRIPD
HPPLVSHQSHQSTSKYDSEDKHTLPTTSLQKTSDDHLSIVEEEENVIASE
EDSTLGGNDGSENDSSSWTCTIQKQPVAEEIQLSSTITSSGGAATRTIVE
EENDVIIPHFTGQHDSLPLRKNQLKQKRRLNPNSPATGTSAGALTPKINN
DN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005622 | intracellular |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005622 |
intracellular |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 286..306 |
| None | No IPR available | PFAM | PF13923 | zf-C3HC4_2 | coord: 17..44
e-value: 2.4E-6
score: 27.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 625..652 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 418..571 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 14..66 |
| IPR000315 | B-box-type zinc finger | SMART | SM00336 | bboxneu5 | coord: 153..194
e-value: 0.046
score: 21.2
coord: 100..145
e-value: 1.4
score: 5.8 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 1..152
e-value: 1.1E-11
score: 44.3 |
| IPR017907 | Zinc finger, RING-type, conserved site | PROSITE | PS00518 | ZF_RING_1 | coord: 33..42 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 18..59
score: 10.498 |
| IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 17..59
e-value: 2.19455E-5
score: 41.6624 |
Blast
The following BLAST results are available for this feature:
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