TCONS_00050087-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050087-protein
Unique NameTCONS_00050087-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length754

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050087-protein ID=TCONS_00050087-protein|Name=TCONS_00050087-protein|organism=Clytia hemisphaerica|type=polypeptide|length=754bp
KKNSLRTMIVFQCAILFTIISSGLGRVFVVDNTSQQDKADGSVGSPFKTI
QDCVNALKTIGKPGDECQIRAGQYHENVKIDNLQGTPNQPFMIRGYGDER
PKIDGTIPIFPAIDPETGDRYNWKTLSEDSKIYKTKINQDIWQLFVNNQM
MTNARWPNAKWSDRSIFKGSLWAKLDNASKKGYMVNKGRSLAQTNINMTN
AVAVLNIGSFNTFVAKVEDHQAGQNWFNYKDTFNNDKFKPSISKYFIEDK
LELLDTPEEWFYNQETKTLYVWMPNGDSPRDHELRGKVQTYAMEITNTHN
LVLKNLDFFATAISAISSRSENIDGVKFDSLIFNYPTYSKRMLGDISLIK
RIRALGRSRRNYGSFVFFNNTFYGSDGATLDVNGFNVTYDNNLWEYNDWT
GANMLTFNGGEGPINTYARNEVYYRNTFRYNDASTSIQPGLNPRIILNHV
VGTCWGTIQNDGAGIHLMRGQQMNAQLRYNWVHNTPKYALRFDGQPPRIG
RNGTMSHNVAFQSNGIMVKGDSHLVENNLAFQKYNENDDDKQGTGCSLCI
LKFVRANPGQINNNSVVINNIADRANGGINVWKRPNVFPVPGRIVKNNKF
NAKIAEQIMDHNNFDFRPVKGSRAAVNGIGPYRYEERMTEYWIPGRKLYK
TSTPVPQNGSVTVKAARRDAVMFLQAWDCRTHIIYFGSNKRAVENARDVD
DINYLGTLENGSNVFYLPNKLSKLATYFWRVDAMTDTGIVYKGDVWNFTT
KGDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031712XLOC_031712Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050087TCONS_00050087Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 28..627
e-value: 2.0E-12
score: 46.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 560..624
coord: 354..522
coord: 288..312
coord: 15..113

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050087-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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