TCONS_00050089-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050089-protein
Unique Name	TCONS_00050089-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	430

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050089-protein ID=TCONS_00050089-protein|Name=TCONS_00050089-protein|organism=Clytia hemisphaerica|type=polypeptide|length=430bp
MAMQDPNQSKSTLHVRSDSKDALDALFMVAESKGSNKMGNASKPFRERNL
PPSFFKQPTDGPVHRKTQSLPILDYGNKFPQQMSPAGAGSGGDNSTSGNV
SNTNNTNQHMRQQNQANQPNHQRFLSSGNVLDTQLPPGWESRTTPQGQSY
FIDHFNRRTTWDDPRKAHSMTMLPQTQQQQQGQQQAQASPQQQQQLQQQQ
QQGGLGPLPDGWEQAHTPEGEVYFINHKKQTTSWSDPRLSQQQQQQQQNM
GSTSPPPMNTQQSMHFMKQQQQQQQQQMLMQQQQQQVQHQHQRSGSNHQI
DPILGSNSLLGNLVRDKYGMPMNIGMGIHGRGSSTDSGLDGMGTLLTPPV
DDPMNMDEVDMEGNQPLNTQNQNQNQDGRLNHNRGLPDCFDSMQGTSVDI
GILDNDPINSLPLSEMDIASMDISNNLTWL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031713	XLOC_031713	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050089	TCONS_00050089	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom
IPR015943	WD40/YVTN_repeat-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 207..239 e-value: 1.6E-10 score: 51.0 coord: 134..166 e-value: 5.2E-11 score: 52.6
IPR001202	WW domain	PFAM	PF00397	WW	coord: 135..164 e-value: 6.3E-10 score: 38.9 coord: 208..237 e-value: 3.6E-9 score: 36.4
IPR001202	WW domain	PROSITE	PS01159	WW_DOMAIN_1	coord: 139..164
IPR001202	WW domain	PROSITE	PS01159	WW_DOMAIN_1	coord: 212..237
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 206..239 score: 17.18
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 133..166 score: 16.688
IPR001202	WW domain	SUPERFAMILY	51045	WW domain	coord: 133..168
IPR001202	WW domain	SUPERFAMILY	51045	WW domain	coord: 201..241
None	No IPR available	GENE3D	2.20.70.10		coord: 179..221 e-value: 2.6E-8 score: 33.2 coord: 106..149 e-value: 2.9E-13 score: 49.0
None	No IPR available	GENE3D	2.20.70.10		coord: 222..238 e-value: 1.9E-12 score: 46.1 coord: 150..178 e-value: 1.0E-11 score: 43.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..384
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..215
None	No IPR available	CDD	cd00201	WW	coord: 210..239 e-value: 2.67023E-8 score: 49.0634
None	No IPR available	CDD	cd00201	WW	coord: 136..165 e-value: 1.9735E-10 score: 54.8414
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 239..430 e-value: 1.8E-5 score: 22.7

Blast

[Close]

BLAST of TCONS_00050089-protein vs. Swiss-Prot (Human)
Match: YAP1 (Transcriptional coactivator YAP1 OS=Homo sapiens GN=YAP1 PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 9.413e-36
Identity = 145/451 (32.15%), Postives = 199/451 (44.12%), Query Frame = 0

Query:   13 LHVRSDSKDALDALF-MVAESKGSNKMGNASKPFRERNLPPSFFKQPTDGPVHRKTQSLPILDYGNKFPQQM----SPA----GAGSGGDNSTSGNVSN--TNNTNQHMRQQNQANQPNHQRFLSSGNVLD-TQLPPGWESRTTPQGQSYFIDHFNRRTTWDDPRKAHSMTMLPQTQQQQQGQQQAQASPQQQQQLQQQQQQGGLGPLPDGWEQAHTPEGEVYFINHKKQTTSWSDPRLSQQ---QQQQQQNMGSTSPPPMNTQQ-------------------SMHFMKQQQQQQQQQMLMQQQQQQVQHQHQRSGSNHQID-----PIL-------------GSNSLLGNLVRDKYGMPMNIGMGIHGRGSSTDSGLDGMGTLLTPPV-DDPMN-MDEVDMEGNQPLNTQNQNQNQDGRLNHNRGLPDCFDSMQGTSVDIGILDNDPIN 409
            +HVR DS+  L+ALF  V   K +N     + P R R LP SFFK P +   H +  S      G   PQ +    SPA    GA S G  + +G VS      T QH+RQ             SS  + D   LP GWE   T  GQ YF++H ++ TTW DPRKA    ML       Q    A  SP  QQ +         GPLPDGWEQA T +GE+Y+INHK +TTSW DPRL  +    Q+  Q+     PPP+  Q                        M++++ + +QQ L++Q  + +      S    ++      P L             G +  L  +  +     +N G   H R  STDSGL  M +   P   DD +N +DE+D       +T    QN+          PD  +++ GT+VD+G L+ D +N
Sbjct:   55 VHVRGDSETDLEALFNAVMNPKTANV--PQTVPMRLRKLPDSFFKPP-EPKSHSRQASTDAGTAGALTPQHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQ-------------SSFEIPDDVPLPAGWEMAKTSSGQRYFLNHIDQTTTWQDPRKA----ML------SQMNVTAPTSPPVQQNMMNSAS----GPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSNQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGT-YHSRDESTDSGL-SMSSYSVPRTPDDFLNSVDEMDTGDTINQSTLPSQQNR---------FPDYLEAIPGTNVDLGTLEGDGMN 464

The following BLAST results are available for this feature:

BLAST of TCONS_00050089-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050089-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
YAP1	9.413e-36	32.15	Transcriptional coactivator YAP1 OS=Homo sapiens G...	[more]

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TCONS_00050089-protein (polypeptide) - C. hemisphaerica