TCONS_00050188-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050188-protein
Unique NameTCONS_00050188-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length732

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050188-protein ID=TCONS_00050188-protein|Name=TCONS_00050188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=732bp
MRCHYEVLGVPRDADDAEIKKSYRKMALRYHPDKNPDKVDEYTEIFREIQ
GAYDVLSDRQERAFYDKHREAILRGGDEFVDDSVDLMQYFNPGCHTGHND
TPNGFYAVYGKVFTMVAEEEEPYLEGESADEYETPDFGDSNSDYETVVAP
FYSYWLSYCTKKSFVWKDKYDIRQAPNRPTQRLMEKENKKIRDQFRRKRN
EEVRALVQYIRKRDRRVKAYREQMEAAKQENKRKADQKRADDIRKRNEAL
EDYTEQDWMTMNDSALDNIDSHFDDQFGGTGANDGVGSTDEGSADEDVEM
VDEFYCIACDKTFKSDKALSNHEKSKKHKENMELIRTEMENELANELLAQ
QNDDDDFDGPEDAQIKDGEVEVMKRIDSMNLTPNVVLRNVIDHTRSPSPK
NSVIPEDSILKHSTDSLEYTKQRGIHREGSAKMKDKKSKKKRNNMPLYDE
EDAKAWEAGLEIEEGLHPRDSLALPRRKSKKKEVRETADRLRHMDEMVQK
GIQATLGDSPLSDSLCVHRKNQSQSGKRNKSSGKQLFEIGGGDSESDSEE
ENLFRSGDENPENEKNSEETKVNENVDDSTEKCAKLENSPVKDSIPYNME
KLANSQHHSKHHKNFEKKAEQVLSEVNENEEGEEVSENNNTEDGTVSKKP
ENKKPARRNKNNKNNSSKNNQQQQQQQQSNETGEEHFACGVCQFEFPTRN
KLFAHIKAEGHAALKEQSALPGNKKSKKNKKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031793XLOC_031793Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050188TCONS_00050188Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR013087Znf_C2H2_type
IPR022755Znf_C2H2_jaz
IPR018253DnaJ_domain_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 181..201
NoneNo IPR availableCOILSCoilCoilcoord: 210..246
NoneNo IPR availableGENE3D3.30.160.60coord: 186..333
e-value: 0.0086
score: 16.0
NoneNo IPR availableGENE3D3.30.160.60coord: 665..708
e-value: 0.0022
score: 17.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 712..732
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 463..685
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 23..38
score: 56.62
coord: 41..61
score: 40.97
coord: 5..23
score: 55.23
coord: 61..80
score: 25.8
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 2..61
e-value: 2.1E-26
score: 103.7
IPR001623DnaJ domainGENE3D1.10.287.110coord: 1..84
e-value: 4.1E-27
score: 93.7
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 4..66
e-value: 5.5E-24
score: 84.0
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 3..69
score: 21.468
IPR001623DnaJ domainCDDcd06257DnaJcoord: 3..58
e-value: 1.56106E-21
score: 88.3713
IPR001623DnaJ domainSUPERFAMILY46565Chaperone J-domaincoord: 2..79
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 301..335
e-value: 1.5E-6
score: 37.7
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 687..711
e-value: 0.21
score: 20.7
coord: 304..328
e-value: 0.35
score: 19.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 689..711
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 306..328
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 687..716
score: 8.974
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 304..333
score: 9.972
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 293..350
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 304..329
e-value: 2.3E-11
score: 43.6
IPR018253DnaJ domain, conserved sitePROSITEPS00636DNAJ_1coord: 46..65

Blast
[Close]
BLAST of TCONS_00050188-protein vs. Swiss-Prot (Human)
Match: DJC21 (DnaJ homolog subfamily C member 21 OS=Homo sapiens GN=DNAJC21 PE=1 SV=2)

HSP 1 Score: 347.436 bits (890), Expect = 2.674e-111
Identity = 183/361 (50.69%), Postives = 249/361 (68.98%), Query Frame = 0 
Query:    1 MRCHYEVLGVPRDADDAEIKKSYRKMALRYHPDKNPDKVDEYTEIFREIQGAYDVLSDRQERAFYDKHREAILRGG--DEFVDDSVDLMQYFNPGCHTGHNDTPNGFYAVYGKVFTMVAEEEEPYLEGESADEYETPDFGDSNSDYETVVAPFYSYWLSYCTKKSFVWKDKYDIRQAPNRPTQRLMEKENKKIRDQFRRKRNEEVRALVQYIRKRDRRVKAYREQMEAAKQENKRKADQKRADDIRKRNEALEDYTEQDWMTMN--DSALDNIDSHFDDQFG-GTGAN-----------DGVGSTDEGSADEDVEMVDEFYCIACDKTFKSDKALSNHEKSKKHKENMELIRTEMENELAN 345
            M+CHYE LGV RDA + E+KK+YRK+AL++HPDKN D   E  E F+ IQ AYDVLSD QERA+YD HREA+L+GG   E+ DDS+DL++YF   C++G+ D   GFY VY  VF M+A+EE   +  E  D++  P FGDS SDY+TVV PFY+YW S+CT+K+F WK++YD RQA NR  +R MEKENKKIRD+ R+++NE VR LV +IRKRD+RV+A+R+ +E    E  RKA++ R     K+ + +E Y EQ WMTM   +  L  +++ ++ +FG G+  N           DG  S DE    ED E+ D+ YC ACDK+FK++KA+ NHEKSKKH+E + L++ ++E E  N
Sbjct:    1 MKCHYEALGVRRDASEEELKKAYRKLALKWHPDKNLDNAAEAAEQFKLIQAAYDVLSDPQERAWYDNHREALLKGGFDGEYQDDSLDLLRYFTVTCYSGYGDDEKGFYTVYRNVFEMIAKEELESVLEEEVDDF--PTFGDSQSDYDTVVHPFYAYWQSFCTQKNFAWKEEYDTRQASNRWEKRAMEKENKKIRDKARKEKNELVRQLVAFIRKRDKRVQAHRKLVEEQNAEKARKAEEMRRQQKLKQAKLVEQYREQSWMTMANLEKELQEMEARYEKEFGDGSDENEMEEHELKDEEDGKDS-DEA---EDAELYDDLYCPACDKSFKTEKAMKNHEKSKKHREMVALLKQQLEEEEEN 355
The following BLAST results are available for this feature:
BLAST of TCONS_00050188-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DJC212.674e-11150.69DnaJ homolog subfamily C member 21 OS=Homo sapiens... [more]
back to top