TCONS_00050285-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050285-protein
Unique NameTCONS_00050285-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length951

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050285-protein ID=TCONS_00050285-protein|Name=TCONS_00050285-protein|organism=Clytia hemisphaerica|type=polypeptide|length=951bp
VFFVPAKRGSSGRPYGGTAMLINKNQINNKPEHILDEDYATVIRINTSQN
TSLLLIGVYLQSVNQSPNLKETYNAQLSALSGVISHFEDISDIVIFGDFQ
SCPQTFESNRLSRPNVLSDSLDNFLDRQALTPTDITHGTGPLYTYSHLTL
DNKSYIDHICISPNLTQAVSDTKVLDPHHLNTGDHLPVTTTLKMYSSIAD
LPDAEHTDDNDFVPTYLWTNKIFTEKYQKTVNDAISEYKNQGVNIENDIL
FLHQTLKESGIRTASELRKDNSFHKINPKPWWNNELSKKKKTLQTMFNAW
KEKGFTKDTKNTEFNRYKLARRDFRILIKTCKNQATAEHYVKLDKIKHSN
PKSYWKNIRLAKGQSQKLYTINGKTSTQDINQEFKNHFDKLLNTPRIHQI
DNNESNTQLQHILEDLINDPSDDFHVINTEVQSAIKELNKNKTTDPYSIK
ADHYLHAVDEPFLSFITQLINDIIKSDVTPTLLATSHIVPVIKSYRKPLS
DPNNYRGISLIPIITKLIEKLILLKCPNLKNHQDAQFGFTSDGSTTHAEL
LLRETICKYNNENTPVYMCSLNAEKAFDCCNWLALFQHLIDKTTLPKQVT
RFLIDLYLKGEANVKYRNHFSDTFRLSQGVRQGSILSPYLYNLYTEEIIE
NIHNLKVGTQLEQSLNTSIIVFADDIILLSPTLKQLQIMIDTCFNYGQKK
GIKFNTDKQKTQFLISGKHPFPNPTLNLNGETIHPQTNLKHLGFQWSIKS
QHLSLLRHFEDRVSELWAVSSSLISCGIRKLHPSSIVTLFKSIVIPKVLY
GLEITNLNVTQSQLLDRQLRSALKSLMGLSKHSTNELLKYFNLTTVTNVL
KQRKINLVNQLMKNPMTSSYLFSILSQPNRSHSLIQDLLDTCQSEGINVI
DLLLSPKKHKLTMVTEDSLDLETESRIKNILENWSVIENRQELKNMLTRY
I
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031842XLOC_031842Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050285TCONS_00050285Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 283..303
NoneNo IPR availableGENE3D3.30.70.270coord: 422..745
e-value: 7.8E-23
score: 80.6
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 485..744
e-value: 1.18418E-32
score: 126.252
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 398..711
IPR005135Endonuclease/exonuclease/phosphataseGENE3D3.60.10.10coord: 3..194
e-value: 4.4E-15
score: 55.5
IPR005135Endonuclease/exonuclease/phosphataseSUPERFAMILY56219DNase I-likecoord: 12..192
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 502..745
e-value: 3.3E-30
score: 105.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 472..733
score: 16.132

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050285-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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